Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq284 116 3e-21 >seq284 Length=917541 Score = 116 bits (128), Expect = 3e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTAC 4997 ||||| || || || || || || || |||||||| |||| |||||| || || |||| Sbjct 767113 TTTTCATTGACAATTCCATCGCTAGCAGCAAAAAAGGCCAGAACATGTGAAATGAAGTGT 767054 Query 4998 TGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCA 5057 | || || | ||| || | || |||||| | | || || | || || ||||| || Sbjct 767053 TTCTCTTCTGACTTCAGCTCTTCCCAGTGAGCAAGGTCCTTTGACAAGTCGACTTCCTCC 766994 Query 5058 ACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATC 5117 |||||||||| || || || ||||| |||||||| ||| |||||| |||||| ||| Sbjct 766993 GCAGTCCAAAAAGAGGCCTCTGCTTTCTTGTACATTTGCCAGATATCATGATACTCAATT 766934 Query 5118 GGAAGTATGACAAATCTGTTGTCGTTAGGTGTAAGAAGCGGTTC 5161 || | | |||||||| || ||| | | ||||||||||| Sbjct 766933 GGGAAGACCACAAATCTCCTGGGGTTGTCTTTTAGAAGCGGTTC 766890 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| || || ||||| || || ||||| ||||||||| || |||||||| ||| Sbjct 767772 GGATCTTTGATGTATGTGTCGATGAGGAGGCTGTACATTTCACTGTGAATATTTTCCATA 767713 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 ||||||||||||||||| ||||| | ||| || || || || || || || | |||| | Sbjct 767712 GCAATCTGAAATCCGTAGAAGCAACGAGCCTCGGTGACCTGCACCTCTTTGCTGAATCGT 767653 Query 4929 TCTAC 4933 || || Sbjct 767652 TCAAC 767648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427027053382556