Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq156 152 1e-31 seq170 107 4e-18 >seq156 Length=1397929 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||||||||| || | ||| || || || ||||| |||||||| || |||| || ||| Sbjct 358627 CTGAGTCTGAGCACCAAATGGAGTGTGGATTCTTTCTGGATGTTATAGTCGGACAAGGTT 358568 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || ||| ||||| ||||||||||||||||| || | | |||||| Sbjct 358567 CTGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCC 358508 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || ||| ||| |||| | | |||| || ||| ||||| | Sbjct 358507 TCTTTGTCCTGGATCTTAGCTTTCACATTCTCAATGGTGTCAGACGGCTCCACTTCCAAT 358448 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| ||||| |||||||| || | ||||||| Sbjct 358447 GTGATAGTCTTGCCTGTGAGGGTCTTCACAAAAATCTGCATT 358406 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| |||||||| || |||||||| ||||||||||| |||| || || | |||||||| Sbjct 360880 GACTAGATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCTTC 360821 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || ||| ||||| |||||||| | ||||| || | | ||||| || || ||||| Sbjct 360820 AAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCTTG 360761 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||||| || || |||| | | |||| || ||| ||||| ||||| || ||||| Sbjct 360760 GATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTTTT 360701 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || ||||| || |||| |||||| Sbjct 360700 GCCAGTCAGGGTCTTGACAAAGATCTGCAT 360671 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| |||||||| ||||||||||| || | || || | ||||| Sbjct 359970 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCC 359911 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| |||||||| | ||||| || | | ||||| || || ||| Sbjct 359910 TCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCT 359851 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || || |||| | | |||| || ||| ||||| ||||| || ||| Sbjct 359850 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTT 359791 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| |||||| Sbjct 359790 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359759 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| |||||||| ||||||||||| || | || || | |||||| Sbjct 360198 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCT 360139 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| ||||| ||||| | |||||||| || | | ||||| || || ||| Sbjct 360138 TCCAACTGTTTGCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATTCCCTCTTTGTCT 360079 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || || |||| | | |||| || ||| ||||| ||||| || ||| Sbjct 360078 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTT 360019 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| |||||| Sbjct 360018 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 359987 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| |||||||| ||||||||||| || | || || | ||||| Sbjct 360426 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCC 360367 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| |||||||| | ||||| || | | ||||| || || ||| Sbjct 360366 TCAAGCTGTTTGCCGGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCTTTGTCT 360307 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || || |||| | | |||| || ||| ||||| ||||| || ||| Sbjct 360306 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTT 360247 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| |||||| Sbjct 360246 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360215 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| |||||||| ||||||||||| || | || || | ||||| Sbjct 360654 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCC 360595 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| ||||| | |||||||| || | | ||||| || || ||| Sbjct 360594 TCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCT 360535 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || || |||| | | |||| || ||| ||||| ||||| || ||| Sbjct 360534 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCAGATGGCTCCACTTCTAGAGTGATGGTT 360475 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| |||||| Sbjct 360474 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 360443 Score = 123 bits (136), Expect = 6e-23 Identities = 163/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| ||||| || || || ||||| || || ||||| ||||| |||||||| | | || Sbjct 357935 CCTAAGTCTCAGCACCAGGTGAAGTGTGGATTCTTTCTGGATATTGTAATCTGAGAGTGT 357876 Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000 | |||||||| | ||||| || ||||| || | ||||||||| || | || |||| Sbjct 357875 GCGTCCATCTTCCAACTGCTTT--CCAGCGAAAATCAACCTCTGCTGATCGGGCGGGATT 357818 Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 || || || || || || ||| ||| || | || | |||| || ||| || ||| Sbjct 357817 CCCTCTTTGTCCTGGATCTTTGCTTTCACGTTTTCAATTGTGTCAGACGGCTCCACCTCA 357758 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||||||||| ||||||| |||||| Sbjct 357757 AGGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 357714 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| |||||||| ||||||||||| || | || || | ||||| Sbjct 359742 AGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCC 359683 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| ||||| | |||||||| || | | ||||| || || ||| Sbjct 359682 TCAAGCTGTTTGCCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCT 359623 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || || |||| | | |||| || ||| ||||| ||||| || ||| Sbjct 359622 TGGATTTTGGCCTTCACGTTCTCAATGGTGTCCGATGGCTCCACTTCCAGAGTGATGGTT 359563 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || |||| |||||| Sbjct 359562 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 359531 >seq170 Length=1283570 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| || |||||||| ||||| ||||| || | | ||| | |||||| Sbjct 1121662 AGCACAAGATGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAGAGTGCGGCCATCT 1121721 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||||||||| | | ||| ||||| || || Sbjct 1121722 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCTTTGTCC 1121781 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | |||| || || || ||||| || || || Sbjct 1121782 TGTATCTTGGCCTTCACATTCTCAATAGTGTCCGATGGTTCCACCTCAAGGGTGATTGTC 1121841 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || ||||| |||| |||||| Sbjct 1121842 TTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 1121873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153756758618772