Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq37278 82.4 8e-11 >seq37278 Length=37914 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/116 (78%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 17278 CTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC--ACG 17335 |||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| || Sbjct 4978 CTCCATAGCTATCTGAAAGCCGTAAAAGCATCTAGCTTCCGTAACCTGAACTTCCTGAC- 4920 Query 17336 TAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || |||| ||| | || ||||| || ||||| || ||||| || || || || || Sbjct 4919 TA-AATCTCTCCACCAGGTTTTCATTGACGATTCCATCGCTGGCCGCAAAGAAAGC 4865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516687722882760