Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq33510 107 2e-18 >seq33510 Length=29102 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTT 13915 |||||||| | ||||| || || | ||| |||||||| || || | ||| |||| Sbjct 25425 TAAAAATCTGCTTCTAAGCTGAAGACCTGATCTTCTTTGTTCGACATGAGGCCTGCTTTT 25484 Query 13916 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13975 |||||||||| ||||| || |||||||| || ||||| || |||||||| || || ||| Sbjct 25485 TGATATTCACCTACTCTCTTCTCAAAGAAATTCGTTTTGCCCTCCAGTGAAATGTTCTCC 25544 Query 13976 ATAAAATCAAATGGATT 13992 || || ||||||||||| Sbjct 25545 ATGAAGTCAAATGGATT 25561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481546069962760