Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq33510 109 7e-19 >seq33510 Length=29102 Score = 109 bits (120), Expect = 7e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 ||| || || || || |||||||||||||| || || || | |||||||| | ||| | Sbjct 27852 ATTCTCGTTAACGATACCGTCACTGGCTGCGAAGAAAGCTAGAACATGTTTAACAAAGTG 27911 Query 36604 TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 36663 | || | ||| | || | ||| || || |||||||| || | ||||||||| || Sbjct 27912 CTGCTCTTGCGGTTTCAGCGACTCCCAGTCCTTCATATCTTTGGAGAGATCCACTTCCTC 27971 Query 36664 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 36723 ||||||| || || || || ||||| || ||||| |||||||||| ||||| | || Sbjct 27972 GGCTGTCCAGAAGGAAGCTTCAGCCTTCTTGTACATTCTCCAGATGTCCTGATACTCGAT 28031 Query 36724 TGGAAAAATAACAAATCT 36741 || || | |||||| || Sbjct 28032 AGGGAAGAGAACAAACCT 28049 Score = 102 bits (112), Expect = 1e-16 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| || || || || | ||| ||||| || || || || ||||||| ||||| || | Sbjct 26571 CCTCATCCCTGCTGATGAGTTCATTGGAGAATGTAAGGCCTGGCATTAATCCACGTTTCT 26630 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| || || | ||||||||||| || || || || || || || || ||||||| Sbjct 26631 TGAGCCAGAAGATTGCAGCAAATGATCCCGAGAAAAAGATGCCCTCGACCGCGGCAAAGG 26690 Query 36300 CAATAAGTCTCTCTCCATAACCGGC-AC--TGTCATGTATCCACTTTTGAGCCCAATCGG 36356 | | | | || | || | ||| || ||| | |||||||| | ||||| |||| Sbjct 26691 CTACCACGCGTTCGCTGTACCTGGCTACTTTGTGGTCGATCCACTTCAGCGCCCAGTCGG 26750 Query 36357 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 36396 ||||||| |||||| || || || || || ||||| || Sbjct 26751 CCTTCTTCTTTACAGCTGGTATGGTTTCGATGGCATTGAA 26790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657081820993880