Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12391 102 1e-16 >seq12391 Length=19613 Score = 102 bits (112), Expect = 1e-16 Identities = 141/192 (73%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| ||||||| ||| | ||| |||||| ||||| || ||||| || ||||| | Sbjct 19000 CATGTAAAAGGTATTCTTTTATTTGGACCACCTGGCACTGGGAAAACTTTGATGGCCAGG 19059 Query 164572 TGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628 |||| ||| | ||||| | || || | | ||||| |||||||||||| | Sbjct 19060 ACAATTGG-CAAAATGCTAAATGCTAGAGAGCC--TCAGATTGTGAATGGTCCTGAAGTG 19116 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT-CAGGAGGCTGA 164687 | ||||||| ||| || ||||| ||||| || |||||||||||||| ||| | ||||| Sbjct 19117 CTTAACAAATTTGTGGGGGAGTCTGAAGCAAACATTAGAAAGTTGTTTGCAGCA-GCTGA 19175 Query 164688 AGAAGAACAAAA 164699 |||||||||||| Sbjct 19176 AGAAGAACAAAA 19187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594884290021200