Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq22802 82.4 7e-11 >seq22802 Length=4402 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||| | ||| ||||| || || |||||||| |||||||||||||| || || || ||| Sbjct 3907 ATTCTGGAAGCACAAACGGAGACTGGAACGCCTTACATGCTCTACAAGGATGCTTGTAAC 3848 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| |||| ||| | || ||||| || || || || || || | || ||| Sbjct 3847 AGGAAGAGCAACCAGAAGAACCTTGGTACAATCAAGTGCAGCAACCTCTGTACAGAGATT 3788 Query 123708 ATCGAATACA 123717 | || |||| Sbjct 3787 GTAGAGTACA 3778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451253965145720