Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq73127 91.5 2e-13 seq22802 87.8 2e-12 >seq73127 Length=3785 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 || || ||||||||||| || | || |||||||||||||||||||| || || ||| || Sbjct 2613 GGCCTGCGTAACAGTCTCCTGTTAGCCCCAATGCCAACAGCCTCCACGGCCCAGATCCTG 2554 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCG 113006 || || ||||||| | | || || ||||| | |||||||| |||||| || || Sbjct 2553 GGAAACAATGAATCCATAGAGCCGTACACCAGTAACATCTACACCAGAAGAGTTCTTTCG 2494 Query 113007 GGAGAGTT 113014 ||||| || Sbjct 2493 GGAGAATT 2486 >seq22802 Length=4402 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 || || ||||||||||| || | || |||||||||||||||||||| || || ||| || Sbjct 1181 GGCCTGCGTAACAGTCTCCTGTTAGCCCCAATGCCAACAGCCTCCACGGCCCAGATCCTG 1122 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 || || ||||||| | | || || ||||| | |||||||| Sbjct 1121 GGAAACAATGAATCCATAGAGCCGTACACCAGTAACATCTA 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619713465157040