Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq22802 107 6e-18 >seq22802 Length=4402 Score = 107 bits (118), Expect = 6e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| ||||||||||| || ||||| | |||||| || || | |||||||||| Sbjct 3778 TGTACTCTACAATCTCTGTACAGAGGTTGCTGCACTTGATTGTACCAAGGTTCTTCTGGT 3837 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || |||||||||||||||||||| || ||||| || ||||| |||||| | |||| Sbjct 3838 TGCTCTTCCTGTTACAAGCATCCTTGTAGAGCATGTAAGGCGTTCCAGTCTCCGTTTGTG 3897 Query 155749 CGTCCAGAATCT 155760 | |||||||||| Sbjct 3898 CTTCCAGAATCT 3909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469316941882559