Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq33510 102 1e-15 >seq33510 Length=29102 Score = 102 bits (112), Expect = 1e-15 Identities = 137/187 (73%), Gaps = 13/187 (7%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTG--CCCGAGA 794434 ||||| ||||| | || || ||||||||||| ||||| | ||| || || ||||||| Sbjct 26606 AGGCCTGGCATTAATCCACGTTTCTTGAGCCAGAAGATTG--CAGCAAATGATCCCGAGA 26663 Query 794435 AAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGT-CCAGGC-- 794491 |||||||||||||||| ||||||||| | || | || ||| ||| || ||| Sbjct 26664 AAAAGATGCCCTCGACCGCGGCAAAGGCTACCACGCGTTCG------CTGTACCTGGCTA 26717 Query 794492 CCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGT 794551 | | | || ||||||||||| |||||| || ||||| ||| | || | || | || | Sbjct 26718 CTTTGTGGTCGATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTTACAGCTGGTATGGTTT 26777 Query 794552 CGATGGC 794558 ||||||| Sbjct 26778 CGATGGC 26784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7902140388589473