Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq45117 84.2 2e-11 seq9979 84.2 2e-11 >seq45117 Length=16876 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027 |||||| | |||| |||| | | | || || ||||||||||| ||||| || |||||||| Sbjct 6210 ATCTTCTAACTGTCTACCTGTAAATATAAGCCGCTGTTGATCCGGAGGAATTCCTTCTTT 6151 Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087 || ||| || ||| | | ||| | ||||| | ||| || ||||| | | | Sbjct 6150 GTCTTGAATCTTAGATTTTACGTTTTCAATGGTATCTGACGGTTCAACTTCAAGAGATAT 6091 Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| || ||||| | ||||| ||||| Sbjct 6090 TGTTTTACCAGTAAGTGTTTTCACTAAAATTTGCAT 6055 >seq9979 Length=2718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || |||||||||||| | || | ||| ||||| || || || | | Sbjct 2156 GACTCTTTCTGGATGTTGTAGTCGGATAATGTTCTTCCATCCTCGAGTTGCTTTCCAGCA 2215 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || || ||||| || || ||||| ||| | Sbjct 2216 AAGATAAGACGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATTTTGGATTTGACA 2275 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || || ||||||| || | || || |||||||||||||| Sbjct 2276 TTCTCGATGGTGTCACTAGGTTCTACTTCGAGGGTGATGGTCTTGCCAGTCAGAGTTTTG 2335 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 2336 ACAAAGATCTGCAT 2349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475821175232520