Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq33510 102 1e-15 >seq33510 Length=29102 Score = 102 bits (112), Expect = 1e-15 Identities = 138/187 (74%), Gaps = 13/187 (7%) Strand=Plus/Minus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 |||||||| || | || | || | ||| ||||||||||||||| ||||||||||| || Sbjct 26784 GCCATCGAAACCATACCAGCTGTAAAGAAGAAGGCCGACTGGGCGCTGAAGTGGATCGAC 26725 Query 1456156 AAGGAGG--GCCTCG-ACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCA 1456211 | | | ||| | ||| ||| || | || | |||||||||| ||||||||| Sbjct 26724 CACAAAGTAGCCAGGTACAG-----CGAACGCGTGGTAGCCTTTGCCGCGGTCGAGGGCA 26670 Query 1456212 TCTTTTTCTCGGG--CAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCC 1456269 ||||||||||||| || || |||| ||||| ||||||||||| || || | ||||| Sbjct 26669 TCTTTTTCTCGGGATCATTTGCTGCA--ATCTTCTGGCTCAAGAAACGTGGATTAATGCC 26612 Query 1456270 CGGTCTT 1456276 || ||| Sbjct 26611 AGGCCTT 26605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7165021011118334