Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq119017 87.8 1e-12 >seq119017 Length=14981 Score = 87.8 bits (96), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 41145 GGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204 || || || || ||||| || ||||| ||| ||||||| || ||||| ||||||||||| Sbjct 9596 GGCGTTCCTTTCAACATTGCCAGTTACGCTTTGCTCACCTACATGATCGCACACGTTACT 9537 Query 41205 AATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCAC 41264 || | || || || || || | ||||| | || |||| ||| | ||| |||| ||| Sbjct 9536 GATCTGAAGCCGGGAGACTTCATCCACACTCTTGGTGATGCTCATGTCTACCTTAACCAC 9477 Query 41265 ATAGAGCCGTTAACAGAA 41282 ||||| || |||| |||| Sbjct 9476 ATAGAACCATTAA-AGAA 9460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396813652355035