Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq60492 188 8e-43 seq9979 178 1e-39 seq112321 158 1e-33 seq48055 111 2e-19 seq20370 100 3e-16 seq8964 100 3e-16 seq45117 93.3 5e-14 seq50389 82.4 9e-11 >seq60492 Length=3139 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || ||||| |||||||| || || |||||||| || || || Sbjct 829 ATGCAGATCTTTGTCAAAACTCTTACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 888 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| |||||||| Sbjct 889 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCACCAGACCAA 948 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||||||||||||||||||||||| | || || | ||||| || Sbjct 949 CAGCGGCTCATCTTTGCTGGTAAGCAACTCGAGGATGGAAGAACATTATCCGACTACAAC 1008 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || ||||| ||| | ||||| |||||||| Sbjct 1009 ATCCAGAAAGAGTCCACACTCCATCTTGTCCTTCGTCTCCGCGGTGG 1055 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || |||||||| || || || Sbjct 142 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 201 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| ||||| ||| Sbjct 202 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCACCAGATCAG 261 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||||||||||||||| | | || || | ||||| || Sbjct 262 CAGCGTCTTATCTTTGCTGGTAAGCAACTCGAGGACGGAAGGACGTTATCCGACTACAAC 321 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| ||||| ||| | ||||| || ||||| Sbjct 322 ATCCAGAAAGAGTCCACTCTCCATCTTGTCCTTCGTCTCCGTGGTGG 368 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || |||||||| || || || Sbjct 370 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 429 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| ||||| ||| Sbjct 430 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCCCCAGATCAG 489 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||||||||||||||||| | || || | ||||| || Sbjct 490 CAGCGTCTTATCTTTGCTGGTAAGCAACTCGAGGATGGAAGGACGTTATCCGACTACAAC 549 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || ||||| ||| | ||||| || ||||| Sbjct 550 ATCCAGAAAGAGTCCACACTCCATCTTGTCCTTCGTCTCCGTGGTGG 596 Score = 183 bits (202), Expect = 3e-41 Identities = 187/244 (77%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || |||||||| || || || Sbjct 1285 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 1344 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| |||||||||||||| ||||| ||||| ||| Sbjct 1345 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 1404 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||||||||||||||| | | || || | ||||| || Sbjct 1405 CAGCGTCTTATCTTTGCTGGTAAGCAACTCGAGGACGGAAGAACGTTATCCGACTACAAC 1464 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||| || || ||||| || ||||| || | ||||| || |||||| ||| |||| Sbjct 1465 ATCCAGAAAGAGTCCACACTCCATCTTGTTCTTCGTCTCCGTGGTGGA----TTTTAAGT 1520 Query 27646 TTTT 27649 | || Sbjct 1521 TGTT 1524 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || |||||||| || || || Sbjct 1057 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 1116 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| |||||||||||||| ||||| ||||| ||| Sbjct 1117 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAGGGTATTCCACCAGATCAG 1176 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || |||||||| ||||| ||||| | | || || | ||||| || Sbjct 1177 CAACGTCTCATCTTCGCTGGTAAACAACTAGAGGACGGAAGAACGTTATCCGACTACAAC 1236 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || ||||| ||| | ||||| || ||||| Sbjct 1237 ATCCAGAAAGAGTCAACACTCCATCTTGTCCTTCGTCTCCGTGGTGG 1283 Score = 131 bits (144), Expect = 2e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 ||| || || |||| | ||| | ||| | || | ||||| ||||||||||| || || Sbjct 648 GGTAGAACCAAGTGACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTAT 707 Query 27513 TCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 ||| ||||||||||||||||| || || |||||||||||||| ||||| | | | || | Sbjct 708 TCCACCAGACCAGCAGCGTCTTATCTTCGCTGGTAAGCAACTTGAGGACGGTAGAACGTT 767 Query 27573 AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||||| || |||| || || ||||| || ||||| ||| | ||||| || ||||| Sbjct 768 ATCCGACTACAACATCCAGAAAGAGTCCACACTCCATCTTGTCCTTCGTCTCCGTGGTGG 827 Score = 109 bits (120), Expect = 6e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||||||||| || ||||| ||||| ||||||||||| || || |||||||| ||| Sbjct 1 ATCCAGGACAAGGAAGGTATTCCACCAGATCAGCAGCGTCTCATCTTCGCTGGTAAACAA 60 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 || ||||| | | || || | ||||| || |||| || || ||||| || ||||| Sbjct 61 CTAGAGGACGGAAGAACGTTATCCGACTACAACATCCAGAAAGAGTCCACACTCCATCTT 120 Query 27613 GTCTTGCGTCTTCGCGGTGG 27632 ||| | ||||| || ||||| Sbjct 121 GTCCTTCGTCTCCGTGGTGG 140 >seq9979 Length=2718 Score = 178 bits (196), Expect = 1e-39 Identities = 186/244 (76%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || |||||||| || || || Sbjct 2121 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 2062 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 2061 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCCCCAGACCAG 2002 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| |||||||| | | || || | ||||| || Sbjct 2001 CAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAGGACGGAAGAACGTTATCCGACTACAAC 1942 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||| || || ||||| || ||||| ||| | ||||| || |||||| ||| |||| Sbjct 1941 ATCCAGAAAGAGTCCACACTCCATCTTGTCCTTCGTCTCCGTGGTGGA----TTTTAAGT 1886 Query 27646 TTTT 27649 | || Sbjct 1885 TGTT 1882 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || ||||| || || || || Sbjct 2577 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTTGAAGTAGAACCAAGT 2518 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 2517 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCACCAGACCAG 2458 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||| ||||| ||||| | | || || | ||||| || Sbjct 2457 CAGCGTCTCATCTTTGCTGGTAAACAACTAGAGGACGGAAGAACATTATCCGACTACAAC 2398 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| ||||| ||| | ||||| || ||||| Sbjct 2397 ATCCAGAAAGAGTCCACTCTCCATCTTGTCCTTCGTCTCCGTGGTGG 2351 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || || || || || | || Sbjct 2349 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTCGAAGTAGAACCTAGT 2290 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 2289 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCCCCAGACCAG 2230 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| |||||||||||||||| | || || | ||||| || Sbjct 2229 CAGCGTCTTATCTTTGCTGGAAAGCAACTCGAGGATGGAAGAACATTATCCGACTACAAC 2170 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || ||||| ||| | ||||| || ||||| Sbjct 2169 ATCCAGAAAGAGTCCACACTCCATCTTGTCCTTCGTCTCCGTGGTGG 2123 Score = 122 bits (134), Expect = 1e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||||||||| || ||||| ||||||||||||||||| || || |||||||| ||| Sbjct 2718 ATCCAGGACAAGGAAGGTATTCCCCCAGACCAGCAGCGTCTCATCTTCGCTGGTAAACAA 2659 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 |||||||| | | || || | ||||| || |||| ||||| ||||| || ||||| Sbjct 2658 CTCGAGGACGGAAGGACGTTATCCGACTACAACATCCAGAAGGAGTCCACACTCCATCTT 2599 Query 27613 GTCTTGCGTCTTCGCGGTGG 27632 ||| | ||||| || ||||| Sbjct 2598 GTCCTTCGTCTCCGTGGTGG 2579 >seq112321 Length=3025 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || || || || || | || Sbjct 2607 ATGCAGATCTTTGTCAAAACACTGACTGGCAAGACCATCACCCTCGAAGTAGAACCTAGT 2666 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 2667 GACACCATCGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCACCAGACCAG 2726 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || |||||||| ||||| ||||| | | || || | ||||| || Sbjct 2727 CAGCGTCTCATCTTCGCTGGTAAACAACTAGAGGACGGAAGAACATTATCCGACTACAAC 2786 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || ||||| ||| | ||||| || ||||| Sbjct 2787 ATCCAGAAAGAGTCCACACTCCATCTTGTCCTTCGTCTCCGTGGTGG 2833 Score = 156 bits (172), Expect = 5e-33 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || |||||||| || || |||||||| || || || Sbjct 2835 ATGCAGATCTTTGTCAAAACTCTGACTGGCAAGACCATCACCCTTGAGGTAGAACCAAGT 2894 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 2895 GACACCATTGAGAATGTCAAATCCAAAATCCAGGACAAGGAAGGTATTCCACCAGACCAG 2954 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| |||||||| ||||||||||| | | || || | ||||| || Sbjct 2955 CAGCGTCTCATTTTCGCTGGTAAACAACTCGAGGACGGAAGAACATTATCCGACTACAAC 3014 Query 27586 GTCCAAAAGGA 27596 |||| || || Sbjct 3015 ATCCAGAAAGA 3025 >seq48055 Length=12036 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||| | || || ||||| || || || || ||||| || |||| | Sbjct 1500 ATGCAAATATTTATGAAAACTCTTACTGGTAAAACAATAACTCTGGAAGTTGTACCGTCG 1441 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | || | ||||| || || ||||| ||||||||||| || || Sbjct 1440 GAAACCATTGATAACGTAAAATCAAAAATCCAAGATAAGGAAGGAATTCCTCCTGATCAA 1381 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| ||||| || | || ||||| | || || | ||||||||| Sbjct 1380 CAGAGGATTATTTTTGCAGGTAATCAGTTAGAAGATGAAAGAACACTGTCTGACTATAAT 1321 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTG 27631 || || || || |||||| ||||| ||||| | || || |||| Sbjct 1320 GTACAGAACGAGAGCACTCTGCATCTTGTCTTACTACTGCGTGGTG 1275 >seq20370 Length=40044 Score = 100 bits (110), Expect = 3e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 32108 AGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACC 32167 |||| || ||| ||| |||||| |||| | || ||||| |||||||| |||||| Sbjct 19360 AGGCATCTCTCATGGGAACCATTATCAATTTGGCCCAGAATTTTGTCGGCAGTAATAACG 19301 Query 32168 TGAACTTACTCGAGCC-ATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCT 32226 ||||| | ||| | || ||| || |||||||| ||| | ||| ||| || ||||||||| Sbjct 19300 TGAACCTCCTCCAACCCATC-GGTCAGTTTGGTACCAGACTCCACGGGGGAAAGGATGCT 19242 Query 32227 GCGAGCTCCCGTTACATCTTCACC 32250 || || ||||||| ||||||||| Sbjct 19241 GCCAGTCCCCGTTATATCTTCACC 19218 >seq8964 Length=41004 Score = 100 bits (110), Expect = 3e-16 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTCA 27462 |||||||| ||||| || || |||||||| || | || | ||| || ||||| |||| Sbjct 22428 ATGCAAATTTTTGTGAAAACACTTACCGGTAAAATAATAATTCTGGAAGTTGATCCGTCA 22487 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | ||| ||||| | | || |||||||||| |||||||| |||| |||||| || Sbjct 22488 G---ATACCATTGATATAGTCAAATCTAAAATTCAAGACAAGGAAGGAACTCCTCCTGAT 22544 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 | ||| | || || ||| |||| | | | | ||||| | || || | |||||| Sbjct 22545 CGACAGAGGCTTATCCATGCAGGTATGTACTTACAAGATGAAAGAACACTTTCTGACTAT 22604 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 ||||| || || || |||||| ||||| ||||| Sbjct 22605 AATGTTCAGAAAGACAGCACTCTGCATCTTGTCTT 22639 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTC 27461 |||| |||| ||||| || || || || || || || || |||| || ||||| ||| Sbjct 631 AATGAAAATTTTTGTGAAAACACTAACTGGTAAAACAATACCTCTGGAAGTTGAACCGTC 690 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 || ||| ||||| ||| | || |||| ||||| ||||| | ||||||||||| || Sbjct 691 AG---ATACCATTGAAAACGTAAAATCTAAGATTCAAGACAAAAAAGGAATTCCTCCTGA 747 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGA 27563 || ||||| || || ||||| ||||| ||| | || |||| Sbjct 748 TCAACAGCGGCTTATCTTTGCAGGTAAACAATTAGAAAATGA 789 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/127 (75%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 27402 TATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 |||| |||||||| | ||| | || || || || || || || |||| || ||||| | Sbjct 1085 TATATATGCAAATGTCTGTGCAAACACTAACTGGTAACACAATATCTCTGGAAGTTGAAT 1144 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | |||| ||||| ||| |||| |||||||||| |||||||| ||||||||||| | Sbjct 1145 CGTCAGATACCATTGAAAACGTGAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCTG 1204 Query 27521 ACCAGCA 27527 | || || Sbjct 1205 AGCAACA 1211 >seq45117 Length=16876 Score = 93.3 bits (102), Expect = 5e-14 Identities = 118/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTCA 27462 |||||||| || || || || ||||| || || || || ||||||| ||||| |||| Sbjct 6055 ATGCAAATTTTAGTGAAAACACTTACTGGTAAAACAATATCTCTTGAAGTTGAACCGTCA 6114 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | ||| ||||| ||| | || |||| ||||| ||||| || ||||||||||| || Sbjct 6115 G---ATACCATTGAAAACGTAAAATCTAAGATTCAAGACAAAGAAGGAATTCCTCCGGAT 6171 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGA 27563 || ||||| || || ||| | |||| || | || ||||| Sbjct 6172 CAACAGCGGCTTATATTTACAGGTAGACAGTTAGAAGATGA 6212 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||| || ||| ||| || | || || |||| || ||||| || | Sbjct 7880 ATGCAAATTTTTGCGAAAACGTCTACTGGTAGAACAATATCTCTGGAAGTTGAACCATTT 7939 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 | ||||| ||| | || |||||||||| |||||||| ||| ||||||| || || Sbjct 7940 CAATCCATTGAAAACCTAAAATCTAAAATTCAAGACAAGGAAGGATTTCCTCCTGATCAA 7999 Query 27526 CAGCGTCTAATTTTTGCTGGT---AAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||| | | || |||| ||| |||| || |||| || || || |||||| Sbjct 8000 CAGAGAATTATCTTTGAAGGTCGTAAGCTGTCAGAAGATGGAACAACACTTGCTGACTAT 8059 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 ||||| || ||||| |||||| ||||| ||||| || Sbjct 8060 AATGTTCAGAAGGAGAGCACTCTGCATCTTGTCTTACG 8097 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| | || || || |||| || || || || ||||||| ||| | || Sbjct 7195 ATGCAAATTGTAGTGAAAACATTTACTGGTAAAACAATATCTCTTGAAGTTCAACCATCA 7254 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || |||| ||||| ||||| || ||||||||||| | || Sbjct 7255 GATACCATTGAAAACGTAAAATCTAAGATTCAAGACAAAGAAGGAATTCCTCCTAATCAA 7314 Query 27526 CAGCGTCTAATTTTTGCTGGTAA 27548 ||||| || || ||||| ||||| Sbjct 7315 CAGCGGCTTATCTTTGCAGGTAA 7337 >seq50389 Length=23789 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || ||||| || || || || |||| | ||||| || Sbjct 11124 ATGCACATTTTAGTGAAAACACTTACTGGTAAAACAATATCTCTGAAAGTTGAACCATCA 11065 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| | || | || |||| ||||| ||||| || ||||||||||| ||||| Sbjct 11064 GATACTATTGAAGATGTAAAATCTAAGATTCAAGACAAAGAAGGAATTCCTCCTGACCAA 11005 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGA 27563 ||||| | || ||||| |||| || | || ||||| Sbjct 11004 CAGCGGCGTATCTTTGCAAGTAAACAGTTGGAAGATGA 10967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569365060609840