Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq119017 82.4 6e-11 >seq119017 Length=14981 Score = 82.4 bits (90), Expect = 6e-11 Identities = 103/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 118470 TGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGG 118529 ||| || ||||| || | |||||||||||||| |||| || || ||||| || || || Sbjct 9468 TGGTTCTATGTGGTTAAGGTAGACATGAGCATCACCAAGAGTGTGGATGAAGTCTCCCGG 9527 Query 118530 TGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAA 118589 | || | || | ||| || |||||||| || | |||| ||| ||||| | || || Sbjct 9528 CTTCAGATCAGTAACGTGTGCGATCATGTAGGTGAGCAAAGCGTAACTGGCAATGTTGAA 9587 Query 118590 AGGAACACCCAGACCCATGT 118609 |||||| |||| |||| ||| Sbjct 9588 AGGAACGCCCA-ACCCCTGT 9606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413806944226348