Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq6537 102 5e-17 >seq6537 Length=3201 Score = 102 bits (112), Expect = 5e-17 Identities = 178/257 (69%), Gaps = 14/257 (5%) Strand=Plus/Minus Query 59144 AGGTCGCGGATGCGCGGCGCGAAGCGGAAGCCTAGCAGGTGCATCAGGGCAAAGACGTGA 59203 |||||||| ||||| || ||||||| | || |||||| | | |||||||| | || Sbjct 2579 AGGTCGCGAATGCGGGGATGGAAGCGGTACCCGAGCAGGGACGTGGCGGCAAAGATGAGA 2520 Query 59204 TCGGTGAAGCCGGCCGTGTCGGTGTAGTGCTCCTCGATCCGCAGGTCGGACTCGTGGTAC 59263 |||||||||||| | ||||||| ||| ||||| | || | | | | | | | | | Sbjct 2519 TCGGTGAAGCCGCCGGTGTCGGCGTACTGCTCTTTGACCTTCTTGCCAGCCGCATTCATC 2460 Query 59264 AGCAGGCCGTCGAGCACATAGGTGGAATCGCGGAC---GCCGACATTCACCACGCGGGTG 59320 |||| ||||||||| | ||| | | |||| || | || | | ||| | ||| Sbjct 2459 AGCAAGCCGTCGAGGATATAAGGTGCCTCGCTCACCGTGGCGGGAATGACC---TGAGTG 2403 Query 59321 CTGAACGGCGCGTACTGGTCGGAGATATGGGTATAGAACAGCCGT----CCCGGCTCGCT 59376 ||| ||||||||||||||||||| ||||| ||| ||| | ||||||||| | Sbjct 2402 GCGAATGGCGCGTACTGGTCGGAGACGTGGGTGTAG----GCCTTTATGCCCGGCTCGTT 2347 Query 59377 ACCGTACTTCGGGTTGA 59393 ||||| || | ||||| Sbjct 2346 GCCGTATTTTGCGTTGA 2330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330364417981762