Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1416 86.0 9e-12 >seq1416 Length=111358 Score = 86.0 bits (94), Expect = 9e-12 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 96894 CCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAG 96953 || || ||| | || | |||||||| || |||||||||||||| | || ||| | || Sbjct 36777 CCTGGTGCTTTCGCAATTTACTTGGAGCCGTGGCACGCGGACGTCTACGAATTTTTGGAT 36836 Query 96954 ATGCGCAAAAACTCT-GGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTG 97012 ||| ||| | || ||| ||||| | ||||||||||| | |||||||| || || Sbjct 36837 -TGCAAAAAGAATCACGGCAAGGAAGAACAAAGAGCCAGGGACCTCTTTTATGCCCTATG 36895 Query 97013 GGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCC 97072 | | ||||| | ||||||||| | ||| | | |||| | |||| ||| ||||| || Sbjct 36896 GATTCCAGACCTCTTCATGAAGAGAGTCGAACAGAATGGCGATTGGACCCTGATGTGTCC 36955 Query 97073 CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118 | | | || || || || ||||| |||||||||||| Sbjct 36956 CCATGAATGCCCAGGACTACATGAGGTTTGGGGGGAAGAGTTTGAG 37001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740859493808840