Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq863 86.0 4e-12 >seq863 Length=118355 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 43922 AGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTT 43981 || |||||||| || |||| |||||| || | | | ||||| || || || || Sbjct 78252 AGAGTGCTCTCCTTCTGAACATTATAGTCAGAAAGTGTTCTTTCATCTTCTAACTGATTA 78311 Query 43982 CCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGT 44041 |||||||| || | || || || || |||| | ||||| || ||| |||||| | Sbjct 78312 CCTGCAAAGATAATCCTCTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATTTTAGAT 78371 Query 44042 TTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAA 44101 || | || ||| ||||||| || || || || | || |||||||||||||| | Sbjct 78372 TTTATGTTATCAATGGTATCTGATGGTTCAACTTCCAGAGTTATTGTTTTACCGGTAAGT 78431 Query 44102 GTCTTCACAAATATTTGCAT 44121 | |||||||| |||||||| Sbjct 78432 TTTTTCACAAAAATTTGCAT 78451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354684382074732