Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12508 96.9 4e-15 >seq12508 Length=14251 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/192 (73%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| ||||||| || | ||| |||||| ||||| || ||||| || ||||| | Sbjct 572 CATGTAAAAGGTATCCTTTTATTTGGACCACCTGGCACTGGGAAAACTTTGATGGCCAGG 631 Query 164572 TGCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628 |||| ||| | |||| | | || || | | ||||| |||||||||||| | Sbjct 632 ACAATTGG-CAAAATGCTAAACGCTAGAGAGCC--TCAGATTGTGAATGGTCCTGAAGTG 688 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT-CAGGAGGCTGA 164687 | ||||||| ||| || ||||| ||||| || |||||||||||||| ||| | ||||| Sbjct 689 CTTAACAAATTTGTGGGGGAGTCTGAAGCAAACATTAGAAAGTTGTTTGCAGCA-GCTGA 747 Query 164688 AGAAGAACAAAA 164699 |||||||||||| Sbjct 748 AGAAGAACAAAA 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595711419944400