Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq12334 82.4 6e-11 seq995 82.4 6e-11 >seq12334 Length=23141 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| |||||||| || || || ||||||||||| | Sbjct 1804 CCACCACGGAGTCGCAGGACCAGATGGAGCGTGGATTCTTTCTGGATGTTGTAGTCTGAG 1745 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 | ||| | | || || | ||||||||||||| | ||||| ||||||||||| Sbjct 1744 AGGGTCCTCCCATCTTCAAGTTGTTTGCCCGCAAAGATAAGACGCTGTTGGTC 1692 >seq995 Length=320003 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| |||||||| || || || ||||||||||| | Sbjct 192527 CCACCACGGAGTCGCAGGACCAGATGGAGCGTGGATTCTTTCTGGATGTTGTAGTCTGAG 192468 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 | ||| | | || || | ||||||||||||| | ||||| ||||||||||| Sbjct 192467 AGGGTCCTCCCATCTTCAAGTTGTTTGCCCGCAAAGATAAGACGCTGTTGGTC 192415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404981563001410