Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1416 87.8 2e-12 >seq1416 Length=111358 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 94174 GGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTG 94233 ||| ||||||| | || | ||||| |||||||||||||| | | || | || || Sbjct 36780 GGTGCTTTCGCAATTTACTTGGAGCCGTGGCACGCGGACGTCTACGAATTTTTGGA-TTG 36838 Query 94234 C-GAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGT 94292 | |||||| |||||||| || | || ||||| |||||||| || || || ||| | Sbjct 36839 CAAAAAGAATCACGGCAAGGAAGAACAAAGAGCCAGGGACCTCTTTTATGCCCTATGGAT 36898 Query 94293 GCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAA 94352 |||||||| || ||||| | ||||| | || || |||| || | |||||| | Sbjct 36899 TCCAGACCTCTTCATGAAGAGAGTCGAACAGAATGGCGATTGGACCCTGATGTGTCCCCA 36958 Query 94353 TGAATGTCCCGGACT 94367 |||||| || ||||| Sbjct 36959 TGAATGCCCAGGACT 36973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494589878281640