Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2947 123 2e-23 >seq2947 Length=87168 Score = 123 bits (136), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAAT--TCTCGCGTCTTCTAAT 15030 ||| || || || ||||| || |||||||| ||| || ||| ||| |||| |||| | Sbjct 53185 ATGGAGTGTGGACTCTTTCTGGATGTTGTAGTCG--GATAATGTTCTTCCGTCCTCTAGT 53242 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 ||||| |||||| | || | |||||| ||||| ||||| ||||||||||| ||| Sbjct 53243 TGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATT 53302 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 ||| ||| ||| | || || || || || |||||| || | ||| ||||| || || Sbjct 53303 TTGGATTTGACATTCTCGATGGTGTCACTTGGTTCTACCTCAAGGGTGATGGTCTTGCCA 53362 Query 15151 GTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| ||||| ||||| || ||||| || Sbjct 53363 GTCAGTGTTTTGACAAAGATCTGCATGTT 53391 Score = 116 bits (128), Expect = 3e-21 Identities = 151/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTTCTAAT 15030 ||| || || || ||||| || |||||||| ||| || || |||| |||| || | Sbjct 52957 ATGGAGTGTGGACTCTTTCTGGATGTTGTAGTCG--GATAACGTTCTTCCGTCCTCGAGC 53014 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 || || ||||| | || | |||||| ||||| |||||| ||||||||||| ||| Sbjct 53015 TGCTTACCAGCAAAGATGAGACGCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATT 53074 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 ||| ||| ||| | || || || || || |||||| || | ||| ||||| || || Sbjct 53075 TTGGATTTGACATTCTCGATGGTGTCACTTGGTTCTACCTCAAGGGTGATGGTCTTGCCA 53134 Query 15151 GTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||||||||| ||||| || |||||| Sbjct 53135 GTCAGAGTTTTGACAAAGATCTGCATA 53161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357298095140315