Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1416 116 6e-21 >seq1416 Length=111358 Score = 116 bits (128), Expect = 6e-21 Identities = 112/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 203922 CGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAG 203981 |||| | ||||||||| | || ||| | ||| || || || ||||| | ||||||| Sbjct 40663 CGTAGAAGTGCATGGATGTCAATTTTCCATAGTTTGGTTCAGCAATGTGGACATTCAGAG 40604 Query 203982 ACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGC 204040 | |||||||| || ||| ||| |||| |||||||||||||| ||||| || |||||||| Sbjct 40603 ATTGGCTTTGATCAATGTAAG-CGCCACGATCTGCGGCCATCTTGATTATAGTCTTCTGT 40545 Query 204041 GAAATCTCCCACACCGTCTTG 204061 ||||| ||||| ||||||||| Sbjct 40544 GAAATTTCCCAGACCGTCTTG 40524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794940915613040