Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12447 87.8 2e-11 >seq12447 Length=33603 Score = 87.8 bits (96), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 868789 CTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACAT 868848 |||||| |||||||| | || || || ||||| ||||||||||||||||| ||| Sbjct 27944 CTTTTCACATCCGAGTTCTACCAGGAGTCGATCGGCTACAAACTCGATGTACTGTGCCAT 27885 Query 868849 GAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTC 868908 |||| || | ||||| ||||| ||| | || || | | | || | ||| || ||||| Sbjct 27884 GAGGGCGACATTCATACCGATCAGCCCTACGGGTACGGCTTTGCAGAGAAATTCCTTCTC 27825 Query 868909 GATCTCGACGGCCTCGACGATGATCT 868934 ||| |||| || ||| |||||||| Sbjct 27824 GATGGCGACCGCATCGCAGATGATCT 27799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105369967499203