Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq5140 86.0 1e-11 >seq5140 Length=69470 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/133 (73%), Gaps = 14/133 (11%) Strand=Plus/Minus Query 81653 TCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC--------------A 81698 ||||||||||||||||| ||||| || ||| | | ||||| ||| | Sbjct 7407 TCCTTCTGTATATTATAGTCAGAAAGTGTTGTTCCATCTTCGAACAGCTGACGACCTTTA 7348 Query 81699 AAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATA 81758 |||| || ||||||||| | ||||| ||| ||||||| |||||||| ||| ||||| Sbjct 7347 AAGACAAGCCTTTGTTGATCGGGAAGAATTCCTTCCTTGTCTTGAATTTTTAATTTTACG 7288 Query 81759 TTTTCAATCGTAT 81771 |||||||| |||| Sbjct 7287 TTTTCAATGGTAT 7275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903167741974240