Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1416 114 2e-20 >seq1416 Length=111358 Score = 114 bits (126), Expect = 2e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 ||| |||||| ||| |||||||| | |||| | || || || || | ||||| ||| Sbjct 37471 GTGAACTCTACAATCTCTGTACAGAGGTTGCTGCATTTGATTGTACCAAGGTTCTTCTGG 37412 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 ||||||||| |||| || |||||||||||||||||||| ||||| || |||||||| ||| Sbjct 37411 TTACTCTTCCTGTTACAAGCATCCTTGTAGAGCATGTATGGCGTTCCGGTCTCCGTTTGT 37352 Query 111398 GATTTGAGAAT 111408 | || ||||| Sbjct 37351 GCTTCCAGAAT 37341 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| ||||||||| | |||||||| || | | ||||||| || || | ||| || Sbjct 39426 TCTTCTGGTGTAGATGTTACTGGTGTATGGCTCTATGGATTCATTGTTTCCGAGGATCTG 39367 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC 110808 || |||||||||||||||||||| || | || ||||||||||| || || Sbjct 39366 GGCCGTGGAGGCTGTTGGCATTGGGGCTAACAGGAGACTGTTACGTAGGCC 39316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627862753226400