Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6250 96.9 3e-15 >seq6250 Length=38080 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27137 TCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACT 27196 |||| | ||||| | ||| | ||||||||||| || || || || ||||||| || | Sbjct 37354 TCTTTAATGGTTCTATGTGGTTAAGGTAGACGTGGGCATCACCAAGAGTGTGGATGAAGT 37413 Query 27197 CTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGA 27256 |||| || | || | || ||||| || |||||||| ||||| | || ||||||||||| Sbjct 37414 CTCCTGGCTTCAGATCAGTAACGTGTGCGATCATGTAGGTGAGCAAAGCGTAGCTGGCGA 37473 Query 27257 TGTTAAAGGGTACCCCGAGCCCC 27279 |||| || || || || | |||| Sbjct 37474 TGTTGAAAGGAACTCCCAACCCC 37496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369410111867729