Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq93348 82.4 8e-11 >seq93348 Length=6301 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || || |||| | |||||||||||| || || || || || ||||| ||||| Sbjct 5124 ATATAGGTGTCGATCAAAAGACTGTACATTTCAGATTGAATATTTTCCATGGCAATCTGG 5183 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||||||||| | ||||| || | || | || | |||| ||| |||| Sbjct 5184 AAGCCATAGAAGCACCTGGCCTCGGCCACCTGGATCTCTTGGCTGAATCTCTCCACCAGA 5243 Query 16592 TTCTCATTCACGATACCGTC 16611 || ||||| |||||||| || Sbjct 5244 TTGTCATTGACGATACCATC 5263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510056812119120