Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq118554 123 2e-23 >seq118554 Length=928 Score = 123 bits (136), Expect = 2e-23 Identities = 390/595 (66%), Gaps = 17/595 (3%) Strand=Plus/Minus Query 18615 TTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGG 18674 |||||| | | || || |||||||| || |||| || || || |||||| | || ||| Sbjct 885 TTTCCTTTGCTGACCACGAAGCGTGTATTCTGGAAGGGGGTTGTCGAAGAGCTTTTGTGG 826 Query 18675 TTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGAT 18734 || | || || | || | |||| || || ||| |||| | | ||||||||||| Sbjct 825 CTTGTTCGGGGCTGTACGAACGCCAAGGATCTGTCCGATAAAAAGGTGCACATATGGGAC 766 Query 18735 ATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGAC 18794 || | || | | ||| | | ||| || | || | | ||| ||| Sbjct 765 GCCAACTGTTCACGAGACTTTTTGGACAGGCGCGGACTAAATCACTATGAGGTGGGAGAC 706 Query 18795 CTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA 18854 | || || | || ||||| || ||||| || ||||| || |||||||| || | || Sbjct 705 TTGGGTCCTGTCTATGGCTTTCAATGGAGGCACTTTGGTGCAGAATATAAGGATAGGCAT 646 Query 18855 TCAAACTATTTACA----GCAAGGAATCGATCAGCTG--CAAACTGTTATAGATACAATT 18908 | | ||||| ||| || | || ||| || | || || || | || | Sbjct 645 ACGGA----TTACACGGGGCAGGGTGTGGACCAGTTGGCCCAA--GTCATCCAAACCGTA 592 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 || | |||| || ||| | | || || || || | ||||| ||| ||| | || Sbjct 591 AAGAATGACCCTGATAGCAGGAGGATTATCATGTCCGCATGGAACCCACCAGATCTGCCT 532 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTC-AGTTTTACGTTGCAAACGGTGAATT 19027 ||| ||||| || ||||| | || |||| ||||||||||| ||||| || | Sbjct 531 AAGATGACGCTACCCCCCTGTCATGCTTT-TGTCCAGTTTTACGTTTGTAACGGCGAGCT 473 Query 19028 ATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGC 19087 |||||||| | |||||| | || ||||| ||||| || || || || ||||| ||||| Sbjct 472 CTCCTGCCATCTGTACCAGCGCTCCGGGGACATGGGGCTCGGCGTTCCTTTCAATATTGC 413 Query 19088 TGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATT 19146 | | ||| || || |||||||| |||| || || |||||| ||||| || ||||| | Sbjct 412 TAGCTATAGTCTGCTGACCTACATGATAGCCCACGTCACAGGA-TTAAAGCCTGGAGACT 354 Query 19147 TAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCT-TTAA 19200 | |||||| |||| || || || |||| | ||||| | |||||| |||| Sbjct 353 TTGTTCATAGCCTGGGAGACGCTCACGTTTATCTCAATCACGTCGATGCTCTTAA 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398469999502470