Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq118554 150 1e-31 >seq118554 Length=928 Score = 150 bits (166), Expect = 1e-31 Identities = 384/579 (66%), Gaps = 8/579 (1%) Strand=Plus/Plus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 ||||||||||| | ||||| | ||| | |||||| ||||| | |||| | ||| ||| Sbjct 299 TTAAGAGCATCGACGTGATTGAGATAAACGTGAGCGTCTCCCAGGCTATGAACAAAGTCT 358 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 |||||| || ||||| || || |||||| | || | ||| |||||||||||| Sbjct 359 CCAGGCTTTAATCCTGTGACGTGGGCTATCATGTAGGTCAGCAGACTATAGCTAGCAATA 418 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT 101857 || || || || || | |||||| || | || | || ||||| || ||||| |||| Sbjct 419 TTGAAAGGAACGCCGAGCCCCATGTCCCCGGAGCGCTGGTACAGATGGCAGGAGAGCTCG 478 Query 101858 CCATCACAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATG 101917 || | ||| || ||||| || || ||||||| || || | | ||| ||||| | Sbjct 479 CCGTTACAAACGTAAAACTGGACAAAAGCATGACAGGGGGGTAGCGTCATCTTAGGCAGA 538 Query 101918 TCTGAAACATTCCAAGCACACAT--TAA-CATCCTTCTATCTGTAGGGTTTGTTTTTATA 101974 |||| ||||| || |||| ||| | |||| ||||| ||||| | |||| Sbjct 539 TCTGGTGGGTTCCATGCGGACATGATAATCCTCCTGCTATC---AGGGTCATTCTTTACG 595 Query 101975 GTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAAC-ACC 102033 || | || | || || ||||| || || | || | ||||| || | | | Sbjct 596 GTTTGGATGACTTGGGCCAACTGGTCCACACCCTGCCCCGTGTAATC-CGTATGCCTATC 654 Query 102034 TTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTC 102093 ||||||||||| || || |||||||| ||||| ||||| ||||| || | ||||| | Sbjct 655 CTTATATTCTGCACCAAAGTGCCTCCATTGAAAGCCATAGACAGGACCCAAGTCTCCCAC 714 Query 102094 ATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAAT 102153 || || || | || | | || ||||| || || | || || ||||| || Sbjct 715 CTCATAGTGATTTAGTCCGCGCCTGTCCAAAAAGTCTCGTGAACAGTTGGCGTCCCATAT 774 Query 102154 GTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAG 102213 |||||| | || || || ||| || ||| | || | | || |||||| || Sbjct 775 GTGCACCTTTTTATCGGACAGATCCTTGGCGTTCGTACAGCCCCGAACAAGCCACAAAAG 834 Query 102214 TTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGT 102252 ||||| ||||| || |||| ||||| | ||| || || Sbjct 835 CTCTTCGACAACCCCCTTCCAGAATACACGCTTCGTGGT 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360316205805866