Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq118491 122 1e-22 seq88155 84.2 3e-11 >seq118491 Length=654 Score = 122 bits (134), Expect = 1e-22 Identities = 287/430 (67%), Gaps = 10/430 (2%) Strand=Plus/Plus Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 |||| |||||| || | || ||||| || ||||||||||| || || |||||| Sbjct 9 ACTCGCAACATGGGGAGAAGGCCATTAGAGATTCCATTGGTCCCCGAAATTACGCTTCCT 68 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 |||| | || || || | || |||||||| || || ||||||| ||| Sbjct 69 GTGGCCCTGATCTTGTGGATGTTGACCCCGATCCCCCCAGCGGACTTGGAGATTAGTGCA 128 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 || |||| | ||| ||| | || || || ||||| || || |||| | || | ||| Sbjct 129 CACTGTTTCAGCGTTTCAAATATACCGTCCATACTGTCCTCTTTCATAGTCAGCAAGAAA 188 Query 54401 CAGCTAGACATTTGGTGACGACTAGTT----CCCGCATTAAATAAGGTAGGAGAAGCGTG 54456 ||||| | | ||| | || ||| || |||||||| | ||| || | || || Sbjct 189 CAGCTCGCAAGTTG----AGCCTTGTTGGTACCAGCATTAAAGAGGGTCGGTGTGGCATG 244 Query 54457 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATT 54515 |||||||||| || || | || ||||| || || ||||| | ||||| ||| || Sbjct 245 TATAAACCATTTCTCCGACATAAGGTTGTAGGTTTCAATAGCGGCGTCTAAATCTTCAAA 304 Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 54575 | |||||||| | || || | ||| |||||||| || || | ||||| | || | Sbjct 305 G-TGAATTCCGAGGGCTACCCTCATCAACATGTGTTGTGGGCGCTCAACTACTTTCCCAT 363 Query 54576 TTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 54635 |||||| || | ||| || | || | ||||| | ||||| || |||| | ||||| Sbjct 364 CTATTTTGAGTAGGTACGACCTCTCTAGGGTTTTGATGCCAAAGTACGTGTACGTAAAGT 423 Query 54636 CTCGTTCGTA 54645 | || ||||| Sbjct 424 CACGGTCGTA 433 >seq88155 Length=6096 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 53759 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 53818 ||||| ||||| || ||||||||||||||||| || | || || || || ||| ||| Sbjct 1451 ATCTCTGTGCAGAGGTTACTACACTTGATGGTCCCCAGGTTCTGCTGGTTCGACTTCTTG 1392 Query 53819 TTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATC 53878 || ||||||||||| || || ||| | || | || || || |||||| || || || Sbjct 1391 TTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCCGTCTCTGTCTGGGCCTCGATGATA 1332 Query 53879 GCTTTCCAGAC 53889 || | |||||| Sbjct 1331 GCGTACCAGAC 1321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592145521483680