Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq118554 260 2e-64 seq46062 138 1e-27 seq82958 116 4e-21 >seq118554 Length=928 Score = 260 bits (288), Expect = 2e-64 Identities = 467/678 (69%), Gaps = 8/678 (1%) Strand=Plus/Plus Query 145606 AAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTC 145665 ||||| || ||| | | ||| || | ||| |||| |||| |||||||| || | Sbjct 224 AAGTCGTCGATGGCTTTCACGCGGCAATTGATATTGAGAGTGGGGAAGGGCCGCGGCTCC 283 Query 145666 CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGG 145725 || ||| || || || | || ||||| ||||| || ||||| ||||| |||||| Sbjct 284 CTCCTCAATTGTTCATTAAGAGCATCGACGTGATTGAGATAAACGTGAGCGTCTCCCAGG 343 Query 145726 ACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGG 145785 || | ||||| || |||| | || |||| |||||| | ||||||||||||||| Sbjct 344 CTATGAACAAAGTCTCCAGGCTTTAATCCTGTGACGTGGGCTATCATGTAGGTCAGCAGA 403 Query 145786 GAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGC 145845 ||||| || || ||||| || || || |||||||||||||| |||||||||||||| Sbjct 404 CTATAGCTAGCAATATTGAAAGGAACGCCGAGCCCCATGTCCCCGGAGCGCTGGTACAGA 463 Query 145846 TGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAG-GTGGCAGGGCGGCAG 145904 |||||||||||||| ||| ||||| |||||| ||| || || ||||| || || Sbjct 464 TGGCAGGAGAGCTCGCCGTTACAAACGTAAAACTGG-ACAAAAGCATGACAGGGGGGTAG 522 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 | ||| ||||| || | |||||||| |||| | || | ||||||||| || || Sbjct 523 CGTCATCTTAGGCAGATCTGGTGGGTTCCATGCGGACATGATAATCCTCCTGCTATCAGG 582 Query 145965 GTTCCTCTT---GATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 || |||| | | | | || || | ||||||||| ||||||||| ||| Sbjct 583 GTCATTCTTTACGGTTTGGATGACTTGGGCC---AACTGGTCCACACCCTGCCCCGTGTA 639 Query 146022 ATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 ||| || | ||| || | || || ||||||||||| || || || ||||| || Sbjct 640 ATCCGTATGCCTATCCTTATATTCTGCACCAAAGTGCCTCCATTGAAAGCCATAGACAGG 699 Query 146082 CCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCC 146141 |||| ||| || ||| ||| || ||| || | | | ||||| || || | Sbjct 700 ACCCAAGTCTCCCACCTCATAGTGATTTAGTCCGCGCCTGTCCAAAAAGTCTCGTGAACA 759 Query 146142 GTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCT 146201 |||||||||||| || | || | |||| || || |||| || ||| | |||| Sbjct 760 GTTGGCGTCCCATATGTGCACCTTTTTATCGGACAGATCCTTGGCGTTCGTACAGCCCCG 819 Query 146202 GATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAG 146261 | | ||| | |||||||||| |||||| ||||||| || | ||| |||||||||| Sbjct 820 AACAAGCCACAAAAGCTCTTCGACAACCCCCTTCCAGAATACACGCTTCGTGGTCAGCAA 879 Query 146262 GGGGAACTGGCCCCGCAG 146279 || ||||| || || || Sbjct 880 AGGAAACTGTCCTCGGAG 897 >seq46062 Length=4436 Score = 138 bits (152), Expect = 1e-27 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| |||||| | ||||||||| || || ||||||||||| ||||||||||| Sbjct 429 AGTCCAGTGATGTGGGCTATCATGTAGGTGAGGAGAGAGTAGCTGGCGATGTTGAAGGGA 488 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || ||| |||| || ||||||||||||||||| || || ||||| ||| | Sbjct 489 ACGCCAAGGCCCGTGTCTCCAGAGCGCTGGTACAGCTGACATGACAGCTCACCGTTACAC 548 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||| | | ||| ||||| ||||| ||||| Sbjct 549 ACGTAGAACTGGACGAAGGCGTGACAGGGAGGCAGCGCCAT 589 >seq82958 Length=1740 Score = 116 bits (128), Expect = 4e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||||||||||||||| ||||| || || ||||||||||| ||| Sbjct 905 GTACTCGGCGCCAAAGTGCCTCCACTGGAAACCGTACACAGGGCCCAGGTCCCCCTCCTC 964 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 || | ||| || | | | |||||||| || || |||||||| |||||||| | Sbjct 965 ATAATGGCTCAGTCCACGCTTGTCCAGGAAGTCTCGTGAACCGTTGGCATCCCAGATGTG 1024 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 || | |||| || || ||| |||||| | || | | |||||| | ||||| Sbjct 1025 CACCTTTTTGTCGGAAAGTTCCTTGCCGTCCGTACAGCCGCGAACGAACCACAAGAGCTC 1084 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCC 146273 || |||||| |||||||| || | || || ||||||| || ||||| || Sbjct 1085 CTCAGCGACCCCTCTCCAGAACACACGTTTTGTAGTCAGCAAAGGAAACTGCCC 1138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588510396878640