Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq118554 143 2e-29 >seq118554 Length=928 Score = 143 bits (158), Expect = 2e-29 Identities = 285/416 (69%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 97045 AGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCA 97104 |||||||| | |||||| | ||||| |||||| ||||| | | |||| ||| |||||| Sbjct 302 AGAGCATCGACGTGATTGAGATAAACGTGAGCGTCTCCCAGGCTATGAACAAAGTCTCCA 361 Query 97105 GGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTA 97164 || ||| | ||||| ||||| ||||| | || | ||| |||||||||||| || Sbjct 362 GGCTTTAATCCTGTGACGTGGGCTATCATGTAGGTCAGCAGACTATAGCTAGCAATATTG 421 Query 97165 AAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA 97224 ||||| || || || ||||| || | || | || || | || ||||| |||| || Sbjct 422 AAAGGAACGCCGAGCCCCATGTCCCCGGAGCGCTGGTACAGATGGCAGGAGAGCTCGCCG 481 Query 97225 TCACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCT 97284 | ||| || |||||||| || ||||||||||||| | || ||| || || | |||| Sbjct 482 TTACAAACGTAAAACTGGACAAAAGCATGACAGGGGGGTAGCGTCATCTTAGGCAGATCT 541 Query 97285 AAGACATTCCAAGC--ACA-CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTA 97341 ||||| || ||| || | | | || ||||| |||| | | || ||| Sbjct 542 GGTGGGTTCCATGCGGACATGATAATCCTCCTGCTATC---AGGGTCATTCTTTACGGTT 598 Query 97342 TTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCT 97398 | || | || || || || || || | || |||| | ||| || ||| Sbjct 599 TGGATGACTTGGGCCAACTGGTCCACACCCTGCCCCGTGTAATCCGTATGCCTA--TCCT 656 Query 97399 TGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCC 97454 | ||||||||| ||||| ||||||||||| || ||||| ||||| || | |||||| Sbjct 657 T-ATATTCTGCACCAAAGTGCCTCCATTGAAAGCCATAGACAGGACCCAAGTCTCC 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345886449966620