Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq114 109 6e-19 seq82192 100 3e-16 seq147940 95.1 1e-14 seq39877 95.1 1e-14 seq142975 93.3 5e-14 seq35616 91.5 2e-13 seq192152 89.7 6e-13 seq186939 87.8 2e-12 seq25179 87.8 2e-12 seq6328 87.8 2e-12 seq148679 86.0 7e-12 >seq114 Length=3964 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| |||| ||| || || | || || |||||||| || ||||| | Sbjct 3085 CCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 3026 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | ||| | || |||||||||| ||| || || | || Sbjct 3025 TAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCT 2966 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||| || || || |||| |||||||| || || || || ||||| |||| Sbjct 2965 CGATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAA 2906 Query 43174 AGATTTGCATTTT 43186 | || |||||||| Sbjct 2905 AAATCTGCATTTT 2893 >seq82192 Length=1419 Score = 100 bits (110), Expect = 3e-16 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 60055 TGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| |||||| | | ||||||||||||| ||||||||||||||||||||| || Sbjct 402 TGAAAAAAATTCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 343 Query 60115 ACTCACCACTATACTACCGAGGATT 60139 |||||||||||||||| | ||||| Sbjct 342 ACTCACCACTATACTAACACGGATT 318 >seq147940 Length=5469 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 60057 AAAAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| ||||||| | | ||||||||||||| |||| |||||||||||||||| |||| Sbjct 4826 AAAAATATTTCTCCGTGTCGGGGAATCGAACCCCGGTCGCCCGCGTGACAGGCGGGCATA 4885 Query 60116 CTCACCACTATACTACCGAGGATT 60139 || |||||||||||| | ||||| Sbjct 4886 CTAACCACTATACTAACACGGATT 4909 >seq39877 Length=3223 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60058 AAAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1910 AAAATATTTCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1851 Query 60117 TCACCACTATACTACCGAGGAT 60138 |||||||||||||| | |||| Sbjct 1850 TCACCACTATACTAACACGGAT 1829 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | | ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 2970 TCTCCGTGTCGGAGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 2911 Query 60125 ATACT 60129 ||||| Sbjct 2910 ATACT 2906 >seq142975 Length=10079 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 5/99 (5%) Strand=Plus/Minus Query 60047 AACGTTTATGAAAAATTTTCTCCTC-----GGCAGGGAATCGAACCCTGGTCTCCCGCGT 60101 || ||||| |||||| ||| ||| | | ||||||||||||| |||||||||||| Sbjct 8096 AAGGTTTAGGAAAAAAAGTCTGCTCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGT 8037 Query 60102 GACAGGCGGACATACTCACCACTATACTACCGAGGATTG 60140 ||||||||| |||||||||||||||||| | |||||| Sbjct 8036 GACAGGCGGGGATACTCACCACTATACTAACACGGATTG 7998 >seq35616 Length=3306 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 2321 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 2262 Query 60125 ATACTACCGAGGATT 60139 |||||| | ||||| Sbjct 2261 ATACTAACACGGATT 2247 >seq192152 Length=1635 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 629 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 570 Query 60125 ATACTACCGAGGAT 60138 |||||| | |||| Sbjct 569 ATACTAACACGGAT 556 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| | | ||||||||||||| |||| |||||||||||||||| |||| Sbjct 164 AAAACATCTCTCCGTGTCGGGGAATCGAACCCCGGTCGCCCGCGTGACAGGCGGGGATAC 105 Query 60117 TCACCACTATACTA 60130 |||||||||||||| Sbjct 104 TCACCACTATACTA 91 >seq186939 Length=1863 Score = 87.8 bits (96), Expect = 2e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1433 TCTCCGTGTCGGGGAATCGAACCCAGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1492 Query 60125 ATACTA 60130 |||||| Sbjct 1493 ATACTA 1498 >seq25179 Length=2471 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGG---CAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||||| ||| |||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 792 AAAAACTTTGCCCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 733 Query 60114 TACTCACCACTATACTA 60130 ||||||||||||||||| Sbjct 732 TACTCACCACTATACTA 716 >seq6328 Length=781 Score = 87.8 bits (96), Expect = 2e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 408 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 467 Query 60125 ATACTA 60130 |||||| Sbjct 468 ATACTA 473 >seq148679 Length=1809 Score = 86.0 bits (94), Expect = 7e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 500 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299667294480