Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq118491 100 6e-16 >seq118491 Length=654 Score = 100 bits (110), Expect = 6e-16 Identities = 192/281 (68%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| ||||||| || |||| ||||| || |||||||| ||||| || | || || Sbjct 407 CTTTGGCATCAAAACCCTAGAGAGGTCGTACCTACTCAAAATAGATGGGAAAGTAGTTGA 348 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 || || |||||||||||| | || || |||| |||||| || || |||| Sbjct 347 GCGCCCACAACACATGTTGATGAGGGTAGCCCTCGGAATTCACTTTGAAGATTTAGACGC 288 Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005 || | || || |||| | ||| || ||| | | ||||||||||||||| || Sbjct 287 CGCTATTGAAACCTACAACCTTATGTCGGAGAAATGGTTTATACATGCCACACCGACCCT 228 Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCT---GAGCTCGTGCTTTCTT-CTTGCCATGC 249061 ||| || || |||||| ||| ||| || ||||| |||||| || | ||| Sbjct 227 CTTTAATGCTGGTACCAACAAGGCTCAACTTGCGAGCT----GTTTCTTGCTGACTATGA 172 Query 249062 AAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAG 249102 |||| ||| | | ||||| || | ||| ||||| |||||| Sbjct 171 AAGAGGACAGTATGGACGGTATATTTGAAACGCTGAAACAG 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070844746722688