Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq118554 120 6e-22 >seq118554 Length=928 Score = 120 bits (132), Expect = 6e-22 Identities = 357/543 (66%), Gaps = 12/543 (2%) Strand=Plus/Minus Query 35249 TTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAA 35308 ||||||| || ||||| ||||| || | |||| | | ||||| ||| ||||||| Sbjct 858 TTCTGGAAGGGGGTTGTCGAAGAGCTTTTGTGGCTTGTTCGGGGCTGTACGAACGCCAAG 799 Query 35309 GAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGAC 35368 || || || | || ||| | ||||| ||| |||| || | || || || ||||||||| Sbjct 798 GATCTGTCCGATAAAAAGGTGCACATATGGGACGCCAACTGTTCACGAGACTTTTTGGAC 739 Query 35369 AGTAGAGGGTTATA-CGATA-GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAAT 35426 || | || || | | || ||| | |||||| ||||| || || || || || |||| Sbjct 738 AGGCGCGGACTAAATCACTATGAG--GTGGGAGACTTGGGTCCTGTCTATGGCTTTCAAT 681 Query 35427 GGCGTCATTTTGGTGCTGAATAT---GATACCTGTTCTTCCGATTATACTGGAAAGGGTA 35483 || | || |||||||| |||||| |||| | | | ||||| || || ||||| Sbjct 680 GGAGGCACTTTGGTGCAGAATATAAGGATA---GGCATACGGATTACACGGGGCAGGGTG 624 Query 35484 TTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATG 35542 | || || |||||| | | | | ||| | | |||| | || ||| || ||||| Sbjct 623 TGGACCAGTTGGCCCAAGTCATCCAAACCGT-AAAGAATGACCCTGATAGCAGGAGGATT 565 Query 35543 ATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATG 35602 || ||| | |||||||| || ||||| | ||| | || || || || || Sbjct 564 ATCATGTCCGCATGGAACCCACCAGATCTGCCTAAGATGACGCTACCCCCCTGTCATGCT 505 Query 35603 ACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGA 35662 || || ||||| || ||| || || | || ||||| |||| ||||| ||| Sbjct 504 TTTGTCCAGTTTTACGTTTGTAACGGCGAGCTCTCCTGCCATCTGTACCAGCGCTCCGGG 445 Query 35663 GATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATG 35722 || | ||| | ||||| || ||||||||||| || ||| ||||| | |||| Sbjct 444 GACATGGGGCTCGGCGTTCCTTTCAATATTGCTAGCTATAGTCTGCTGACCTACATGATA 385 Query 35723 GCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATT 35782 ||| | || |||| || ||||| ||| | | | || || ||||| ||| || Sbjct 384 GCCCACGTCACAGGATTAAAGCCTGGAGACTTTGTTCATAGCCTGGGAGACGCTCACGTT 325 Query 35783 TAT 35785 ||| Sbjct 324 TAT 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986891401929530