Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq93348 95.1 2e-14 >seq93348 Length=6301 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 ||| || | ||| || |||||||||||||| |||||||| || ||||| ||||| ||||| Sbjct 5117 ATCCTTGATATAGGTGTCGATCAAAAGACTGTACATTTCAGATTGAATATTTTCCATGGC 5176 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 ||||| || || ||||| || || ||||||| | ||| | ||| | |||| || Sbjct 5177 AATCTGGAAGCCATAGAAGCACCTGGCCTCGGCCACCTGGATCTCTTGGCTGAATCTCTC 5236 Query 33962 TGCTAAATTTTCATTCACTATTCCATC 33988 | | ||| ||||| || || ||||| Sbjct 5237 CACCAGATTGTCATTGACGATACCATC 5263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628145701944480