Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq150367 120 3e-22 >seq150367 Length=3699 Score = 120 bits (132), Expect = 3e-22 Identities = 355/541 (66%), Gaps = 31/541 (6%) Strand=Plus/Plus Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 || || | ||| ||||| ||||| || ||||||||||| ||||| || ||||| || || Sbjct 1839 AACATCAGACAGGCAAAGTCACAGTGTAGGCCCTCATCCCTACTGATCAGTTCATTGGAG 1898 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 || || | || ||||| | ||| ||||| | ||||| | || || || || || Sbjct 1899 AACGTCAGCCC-GGCATTATCCCTATCTTTTTCAGCCAAATGTTAGCTGCAAAGGAGCCC 1957 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 || || || || | || || ||| ||| || | ||| || ||| || Sbjct 1958 GAGAAAAAGATGTCTTCCACCGCATTAAAGGCAA-----------CCA--CGCTGCATT- 2003 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 || | |||||| | ||||||||||| || || || | | | | || || Sbjct 2004 --GTCTCCGATCCATCTAAGAGCCCATTCAGCCTTCTTCTTTGCACACGGCGTGGTCTCA 2061 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTA 13948 | |||||||| | || |||||||| | | | ||||| || | || || || | | Sbjct 2062 TTCGCATTGAAGAGGTGCTCCTTCTCCTGTGGATCCTTGA--TGAAGGTGTCGATCAAGA 2119 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 || |||||||||||||| || ||||| || || || || || || || || || || | Sbjct 2120 GACTGTACATTTCAGAGTGAATATTTTCCATGGCAATTTGGAAGCCCTAGAAGCACCTGG 2179 Query 14009 CTTCTGAC-CATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT---- 14063 | || | | | ||| ||||| | ||||| || ||| || ||||| || | Sbjct 2180 CCTCGGTCACCTTG-ACCTCTTGGCTGAATCTCTCCACCAGATTCTCATTGACGTTGGTT 2238 Query 14064 -ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14122 ||||| ||||| ||||| ||||||| | || ||| || |||| | | |||| Sbjct 2239 GTCCATCGCTAGCCGCAAAGAATGCCAGGACGTGTTTGATGAAGTGTCTTTTGTCATCAC 2298 Query 14123 TGAGTTTTTTCCAATCGGCTAAATCC---TTAGAAAGATCTACTTCATCAACTGTCCAAA 14179 | || || | ||| | ||| || ||| || || || |||||||| ||||||||||| | Sbjct 2299 TCAGCTTCTCCCAGTAGGCCAAGTCCTCTTTCGAGAGGTCTACTTCCTCAACTGTCCAGA 2358 Query 14180 A 14180 | Sbjct 2359 A 2359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477318350136240