Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq114 100 2e-16 >seq114 Length=3964 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48537 CCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAA 48596 |||| || |||||||| |||| || || | |||||||||||||| ||| || | | Sbjct 3085 CCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 3026 Query 48597 TTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG 48656 | | ||||||||| || ||| | | ||||||||| || ||| ||| | | | Sbjct 3025 TAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCT 2966 Query 48657 CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAA 48716 | || || |||| | ||| ||||| || ||||| |||||||| || || ||||||| Sbjct 2965 CGATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAA 2906 Query 48717 AAATCTGCAT 48726 |||||||||| Sbjct 2905 AAATCTGCAT 2896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420160913168366