Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq168791 181 2e-41 seq146529 84.2 3e-12 seq99132 80.6 4e-11 >seq168791 Length=2739 Score = 181 bits (200), Expect = 2e-41 Identities = 186/243 (77%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| |||| | | | || || |||||||| || ||||||||||| || || Sbjct 736 CGCCAAGCGTCACCGCAAAGTTTTGCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 795 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| || |||||||| ||||||||| | || || | |||| || |||| Sbjct 796 CCGACGTCTGGCCCGCCGTGGTGGTGTCAAGCGTATTTCCGGTCTCATCTACGAGGAGAC 855 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | ||| ||||||| ||| ||| |||| |||||| || ||| ||||| Sbjct 856 CCGTGGCGTCCTCAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 915 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || |||||||| |||||| ||||||| | ||||| || |||| || || || Sbjct 916 GCACGCCAAGCGTAAGACCGTCACCGCCATGGACGTTGTCTACGCTCTGAAGCGCCAGGG 975 Query 16672 CCG 16674 ||| Sbjct 976 CCG 978 >seq146529 Length=3084 Score = 84.2 bits (92), Expect = 3e-12 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | ||| || || |||||||| || ||||||||||| || || Sbjct 2674 CGCCAAGCGACACCGTAAGGTTCTCCGGGACAACATCCAGGGCATCACCAAGCCCGCCAT 2615 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| || || || |||||| | |||| || | |||| || |||| Sbjct 2614 CCGCCGTCTCGCTCGCCGAGGAGGTGTCAAGAGGATCTCCGGGCTCATCTACGAGGAGAC 2555 Query 16552 TCGTGATGTTTTGAAG 16567 |||| ||| || ||| Sbjct 2554 ACGTGGTGTATTAAAG 2539 >seq99132 Length=1126 Score = 80.6 bits (88), Expect = 4e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||||||||| || ||||| ||||||||||| | || Sbjct 429 CTCCGGGACAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTGGCTCGCAGGGGA 488 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560 || |||||| | |||| || | ||||||| |||| |||| ||| Sbjct 489 GGTGTCAAGAGGATCTCCGGGCTCATCTATGAGGAGACACGTGGTGT 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78881032279638