Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq114 127 2e-24 seq184351 111 1e-19 seq131419 93.3 4e-14 >seq114 Length=3964 Score = 127 bits (140), Expect = 2e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| || || |||||| ||||| ||||||||||| ||| ||| Sbjct 3085 CCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 3026 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| || ||||| || || ||||| ||| ||| ||| | | || Sbjct 3025 TAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCT 2966 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| |||| | ||||| |||| ||| | ||| |||||||| || || || || | Sbjct 2965 CGATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAA 2906 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 2905 AAATCTGCAT 2896 >seq184351 Length=2863 Score = 111 bits (122), Expect = 1e-19 Identities = 148/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 |||||||||||||| || | ||||||||| || |||||||| ||||| | || Sbjct 2355 ATGCCGTGCGTGCGGCGCAAGGCGGACTGGGCGCTGCAGTGGATCGCCAGCAAGGACACG 2296 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || |||| |||||| | |||||||| || ||||||||||| ||||| || ||| Sbjct 2295 ACGTTCGGCGAGCGGCTTGTGGCCTTCGCTGCGGTGGAGGGCGTGTTTTTCTCGGGCTCG 2236 Query 46204 TTTGCCGCCATCTT-TTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 ||||| |||||||| | | |||| | |||| | | |||||||||||||| || Sbjct 2235 TTTGCGGCCATCTTCTGGCTGAAAAAGCGCGGGC-TGCTCCCCGGCCTGACGTTCTCTAA 2177 Query 46263 CGAGCTGATATCGCGCGACGAGG 46285 ||||||||| || ||||||| Sbjct 2176 CGAGCTGATCAGCCGAGACGAGG 2154 >seq131419 Length=1007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | |||||||||||| || |||||||| || | Sbjct 768 CCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 827 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| || |||| | | |||||||||||||||| Sbjct 828 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 887 Query 131128 ATTCCT 131133 || ||| Sbjct 888 ATACCT 893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470759806621440