Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq118491 122 1e-22 seq93348 86.0 8e-12 seq195337 84.2 3e-11 >seq118491 Length=654 Score = 122 bits (134), Expect = 1e-22 Identities = 287/430 (67%), Gaps = 10/430 (2%) Strand=Plus/Plus Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322 |||| |||||| || | || ||||| || | ||||||||||| || || |||||| Sbjct 9 ACTCGCAACATGGGGAGAAGGCCATTAGAGATTCCATTGGTCCCCGAAATTACGCTTCCT 68 Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 |||| | || || || | || || ||||| || || ||||||| ||| Sbjct 69 GTGGCCCTGATCTTGTGGATGTTGACCCCGATCCCCCCAGCGGACTTGGAGATTAGTGCA 128 Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442 || |||| | ||| ||| | || || || ||||| || || |||| | || | ||| Sbjct 129 CACTGTTTCAGCGTTTCAAATATACCGTCCATACTGTCCTCTTTCATAGTCAGCAAGAAA 188 Query 63443 CAGCTAGACATTTGGTGACGACTAGTT----CCCGCATTAAATAAGGTAGGAGAAGCGTG 63498 ||||| | | ||| | || ||| || |||||||| | ||| || | || || Sbjct 189 CAGCTCGCAAGTTG----AGCCTTGTTGGTACCAGCATTAAAGAGGGTCGGTGTGGCATG 244 Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATT 63557 |||||||||| || || | || ||||| || |||||||| | ||||| ||| || Sbjct 245 TATAAACCATTTCTCCGACATAAGGTTGTAGGTTTCAATAGCGGCGTCTAAATCTTCAAA 304 Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63617 | |||||||| | || || | ||| |||||||| || || | ||||| | || | Sbjct 305 G-TGAATTCCGAGGGCTACCCTCATCAACATGTGTTGTGGGCGCTCAACTACTTTCCCAT 363 Query 63618 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63677 |||||| | | ||| || | || | ||||| | ||||| || |||| | ||||| Sbjct 364 CTATTTTGAGTAGGTACGACCTCTCTAGGGTTTTGATGCCAAAGTACGTGTACGTAAAGT 423 Query 63678 CTCGTTCGTA 63687 | || ||||| Sbjct 424 CACGGTCGTA 433 >seq93348 Length=6301 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 ||| || | ||| || || ||||||||||| |||||||| || ||||| ||||| ||||| Sbjct 5117 ATCCTTGATATAGGTGTCGATCAAAAGACTGTACATTTCAGATTGAATATTTTCCATGGC 5176 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 || || || || |||||||| || ||||||| Sbjct 5177 AATCTGGAAGCCATAGAAGCACCTGGCCTCGG 5208 >seq195337 Length=3657 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 ||||| ||||| || || |||||||||||||| || | ||||| || || ||| ||| Sbjct 2746 ATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCCCAGGTTTTGCTGGTTGGACTTCTTG 2805 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 || ||||||||||| || || ||| | || | || || || |||||| || || || Sbjct 2806 TTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCGGTCTCCGTCTGAGCCTCGATGATA 2865 Query 62921 GCTTTCCAGAC 62931 || | |||||| Sbjct 2866 GCGTACCAGAC 2876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631949976333600