Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq37729 96.9 7e-15 seq75668 95.1 2e-14 seq57853 95.1 2e-14 seq18064 84.2 4e-11 >seq37729 Length=4247 Score = 96.9 bits (106), Expect = 7e-15 Identities = 72/82 (88%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 2466 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 2407 Query 142564 CCCACATCGGGCAGAAGTCGCC 142585 |||||||||||| ||| ||||| Sbjct 2406 CCCACATCGGGC-GAA-TCGCC 2387 >seq75668 Length=2809 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 1341 ATTGCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCG 1282 Query 142561 AGCCCCACATCGGGC 142575 ||||||||||||||| Sbjct 1281 AGCCCCACATCGGGC 1267 >seq57853 Length=3278 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1186 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 1245 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 1246 CCCACATCGGGC 1257 >seq18064 Length=4040 Score = 84.2 bits (92), Expect = 4e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 1753 AGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAG 1812 Query 142563 CCCCACATCGGGCAGAAG 142580 |||||| | |||| |||| Sbjct 1813 CCCCACGTTGGGC-GAAG 1829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025040118379806