Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq88155 102 1e-16 seq195337 91.5 2e-13 >seq88155 Length=6096 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||||| | ||| || || || | || || ||| ||||| |||| ||||| || Sbjct 1463 GTGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCCCAGGTTCTGCTGG 1404 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||||| |||| |||||||||||||| |||||||| || | |||||||| || ||| Sbjct 1403 TTCGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCCGTCTCTGTCTGG 1344 Query 114632 GACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGT 114672 | || || ||||| | |||||| | |||| |||||| Sbjct 1343 GCCTCGATGATAGCGTACCAGACTTGTTGGGCTTTCACAGT 1303 >seq195337 Length=3657 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||||| | ||| || || || | || || ||| ||||| |||| ||| | || Sbjct 2734 GTGTACTCCACAATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCCCAGGTTTTGCTGG 2793 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||||| |||| |||||||||||||| |||||||| || | || |||||||| || Sbjct 2794 TTGGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCGGTCTCCGTCTGA 2853 Query 114632 GACTTGAGAATAGCCTTCCAGAC 114654 | || || ||||| | |||||| Sbjct 2854 GCCTCGATGATAGCGTACCAGAC 2876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595767880067280