Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq114 91.5 1e-13 seq131419 84.2 2e-11 >seq114 Length=3964 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | | |||||| | || || |||||||||||||| | || Sbjct 3083 TTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATA 3024 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || || || || || || || || || || ||| ||| ||| Sbjct 3023 AGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCG 2964 Query 64376 ACTGTATC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 | || || |||| || || || | || | |||||| ||||||| || || || || Sbjct 2963 ATAGTGTCGGACGGC-TCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAA 2905 Query 64435 AATTTGCATTTT 64446 ||| |||||||| Sbjct 2904 AATCTGCATTTT 2893 >seq131419 Length=1007 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 798 GTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 857 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||| | || |||| ||||||||| ||||| || ||| Sbjct 858 GCAAAGATAAGCCTCTGCTGGTCCGGAGGGATACCT 893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498318455405040