Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq88155 93.3 5e-14 seq195337 82.4 9e-11 >seq88155 Length=6096 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 |||||||| | ||| || || || | || || ||| ||||| |||| ||||| || Sbjct 1463 GTGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCCCAGGTTCTGCTGG 1404 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || ||||| |||| |||||||||||||| ||||| || || | |||||||| || ||| Sbjct 1403 TTCGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCCGTCTCTGTCTGG 1344 Query 116593 GACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGT 116633 | || || ||||| | ||| || | |||| |||||| Sbjct 1343 GCCTCGATGATAGCGTACCAGACTTGTTGGGCTTTCACAGT 1303 >seq195337 Length=3657 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 |||||||| | ||| || || || | || || ||| ||||| |||| ||| | || Sbjct 2734 GTGTACTCCACAATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCCCAGGTTTTGCTGG 2793 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || ||||| |||| |||||||||||||| ||||| || || | || |||||||| || Sbjct 2794 TTGGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCGGTCTCCGTCTGA 2853 Query 116593 GACTTGAGAATAGCCTTCCATAC 116615 | || || ||||| | ||| || Sbjct 2854 GCCTCGATGATAGCGTACCAGAC 2876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611878599124560