Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq121234 138 1e-27 seq53644 104 3e-17 seq142507 93.3 5e-14 >seq121234 Length=1358 Score = 138 bits (152), Expect = 1e-27 Identities = 414/629 (66%), Gaps = 19/629 (3%) Strand=Plus/Minus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||||| || || || | || ||||| || || ||||| || ||||| || | ||| || Sbjct 622 GATGGCAGCCTGCACAGCGGCACCGTAAGCCACAGCCTCGTCAGGGTTGATGGATTTGTT 563 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 ||||||||| ||||| || | || | | || || || || || || || || || Sbjct 562 CAGTTCTTTGCCGTTGAAGAAGTCTTGAAGGAGTTTCTGGATCTTGGGAATACGGGTTGA 503 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 || || ||||| |||| ||| | | || || || || ||||| | ||| || || | Sbjct 502 CCCTCCAACCAACACGACTTCGTGGATCTTAGACTTGTCCATCTTGGCGTCGCGGAGGGC 443 Query 7201 TTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACG 7257 || || || || |||| ||| ||||||| || |||||| |||||||| | Sbjct 442 CTTCTCCACGGGCTCCAGCGTAC---CGCGGAACAGATCAGAACACAGCTCCTCAAACCT 386 Query 7258 TGCACGGGTAATGGATGTA-TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGG 7316 || || || | | || | ||||| || | || |||| || || || || || | || Sbjct 385 GGCCCGCGTCA-GCTTGGAGTAGAAGTCGATCCCCTCGTGTAGAGAGTCGATCTCTAAGG 327 Query 7317 TTG--TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACG 7374 || | |||| | || || | ||||| ||| || || ||||||||||||| | || Sbjct 326 CTGCCTCCGTGC--TGGACGACAGCGTTCTCTTGGCCCGTTCACACGCCGTTCTCAGCCG 269 Query 7375 ACGAAGGGCACGCGGGTT--ACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCA 7432 ||| | ||| || ||||| | || || || ||||| | || || ||||| || || Sbjct 268 ACGGATGGCCCGGGGGTTGGAGCGCAA--GTCCTTCTTGTACTTCCGCTTAAATTCCTCG 211 Query 7433 GAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCG 7492 |||||| | || ||| ||||| ||||| || || | || || || || || Sbjct 210 ATGAAGTGGTTGACGACTCTGTTGTCGAAGTCTTCCCCGCCGAGATGGGTGTCGCCGGCC 151 Query 7493 GTCGCTTTGACTTCAA--AGATACCTC-CTTCAATGTTTAACAACGAAACATCAAACGTA 7549 || || ||||||| || | || | | || ||| | | | || || || ||||| Sbjct 150 GTGGCGCGCACTTCAAACAGCTGCCCCTCGTCGATGGTCAGGATGGAGACGTCGAACGTC 91 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || |||| ||| | || || ||||| | || || |||||| || || ||| Sbjct 90 CCTCCGCCCAAGTCGTAGATCAGCACGTTTCTCTCCCCGCTCAGGTTCTTGTCCAGTCCG 31 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATT 7638 || |||| || || || || || || || Sbjct 30 TAGGCGAGCGCAGCAGCTGTCGGCTCGTT 2 >seq53644 Length=3628 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| || || ||||||||||| || || || |||||||| || || || || || | Sbjct 3185 TTCTTGTCCAGTCCGTACGCGATGGCGGCGGCGGTTGGTTCGTTGATGATTCGGAGGACG 3244 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || ||||| | ||||| | ||||| ||||| ||||| || || |||||||| |||||| Sbjct 3245 TTGAGGCCTGAGATAGTACCGGCATCCTTCGTGGCTTGGCGCTGGGAATCGTTGAAGTAG 3304 Query 7715 GCCGGGACCGTTACGACCGC 7734 ||||| || || || || || Sbjct 3305 GCCGGAACGGTAACCACAGC 3324 >seq142507 Length=2538 Score = 93.3 bits (102), Expect = 5e-14 Identities = 253/385 (66%), Gaps = 2/385 (1%) Strand=Plus/Plus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAAT 22500 || |||||||||||||| ||| || | || || || | || | |||||| || Sbjct 1785 AAGTTTTATCAGGCATCGACAAGCGAAATGTATGGGCTGGTGCAGGAGATTCCACAGAAG 1844 Query 22501 GAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG 22560 || | ||||| || || ||| | || || ||||| | ||| || | | ||| ||| Sbjct 1845 GAGACCACACCATTCTATCCGAGATCCCCCTATGGAGCAGCGAAGGTATATGCATACTGG 1904 Query 22561 GCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAAC 22620 || || || ||||| | ||| ||| ||||| |||||||| || |||||||| Sbjct 1905 ATAGTGGTCAACTACAGAGAGGCCTACAATATATTTGCCTGCAATGGGATCCTGTTCAAC 1964 Query 22621 CACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCT 22680 ||||| || ||| |||| |||| || || || | || ||||| ||||| || Sbjct 1965 CACGAGAGTCCAAGAAGGGGAGAAACATTTGTAACGAGGAAGATAACCAGAGGTGTTGCC 2024 Query 22681 AATATCAGTGCA-GGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGA 22739 || || | | || || | ||| | | | |||||| || || || | || |||| Sbjct 2025 AAAAT-ATTTCACGGACAGCAAGACGATATTGTCCTTGGGAATCTTGACTCTAACAGAGA 2083 Query 22740 TTGGGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACC 22799 |||||| || || || ||||| | | ||||||| || ||||| || || || Sbjct 2084 TTGGGGACACGCCAAGGACTACGTCAGAGCCATGTGGATGATCTTACAGCATGAGGTGCC 2143 Query 22800 GGAAGATTTTGTTATTGCAACAGGC 22824 || || |||||||| || || ||| Sbjct 2144 TGATGACTTTGTTATAGCCACTGGC 2168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633446792347440