Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq88155 105 8e-18 seq195337 100 3e-16 >seq88155 Length=6096 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 |||||||| | ||| ||||| || | ||| || ||| || ||||||| |||| ||| Sbjct 1463 GTGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCCCAGGTTCTGCTGG 1404 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||| |||||||||||||||||||| ||||||||||| | |||||||| ||||| Sbjct 1403 TTCGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCCGTCTCTGTCTGG 1344 Query 106625 GACTTGAGAATTGCCTTCCACAC 106647 | || || || || | ||| || Sbjct 1343 GCCTCGATGATAGCGTACCAGAC 1321 >seq195337 Length=3657 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 |||||||| | ||| || || || | |||| || ||| || ||||||| || | ||| Sbjct 2734 GTGTACTCCACAATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCCCAGGTTTTGCTGG 2793 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||| |||||||||||||||||||| ||||||||||| | || ||||||||||| Sbjct 2794 TTGGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCGGTCTCCGTCTGA 2853 Query 106625 GACTTGAGAATTGCCTTCCACAC 106647 | || || || || | ||| || Sbjct 2854 GCCTCGATGATAGCGTACCAGAC 2876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588414651717840