Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq184351 145 1e-29 seq150367 141 2e-28 seq23123 107 4e-18 seq195337 105 1e-17 seq93348 98.7 2e-15 seq88155 98.7 2e-15 seq178124 93.3 8e-14 >seq184351 Length=2863 Score = 145 bits (160), Expect = 1e-29 Identities = 225/320 (70%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| |||||||| ||| |||| ||||| || || || | | ||| | || ||| Sbjct 2156 TCGTCTCGGCTGATCAGCTCGTTAGAGAACGTCAGGCCGGGGAGCAGCCCGCGCTTTTTC 2215 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || ||||| || ||||| ||||| || | ||||||||| || ||||| || Sbjct 2216 AGCCAGAAGATGGCCGCAAACGAGCCCGAGAAAAACACGCCCTCCACCGCAGCGAAGGCC 2275 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 |||| ||| ||||| | | || |||| | |||||| ||||||||||| ||| Sbjct 2276 ACAAGCCGCTCGCCGAACGTCGTGTCCTTGCTGGCGATCCACTGCAGCGCCCAGTCCGCC 2335 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCG 48394 || | | ||| ||||| ||||| | ||| |||| ||| ||| | ||| | | | Sbjct 2336 TTGCGCCGCACGCACGGCATGGTCTCCACGGCGTGGAACAGCATCTGTCGCTCGGCCGGG 2395 Query 48395 TCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATA 48451 || | ||| | | | ||||| | ||||||||| |||||||| || || || Sbjct 2396 TCGCGGATGTAGCTGTCAATCAGCAGGCT---GTACATCTCCGAGTGCACGTTTTCCATG 2452 Query 48452 GCGATCTGGAACCCGTAGAA 48471 ||||||||||| || ||||| Sbjct 2453 GCGATCTGGAAACCATAGAA 2472 Score = 104 bits (114), Expect = 4e-17 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || | ||||| ||||| |||||||||| ||| |||| || |||||||||||| Sbjct 1908 CTGGTATTCAGCGACTCTCTTCTCGAAGAAGTTTGCCTTGCCCTGCAGCGAGATGTTCTC 1967 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||| |||||| ||| || | || | || || ||||| Sbjct 1968 CATGAAGTCGAAGGGGTTTTCCACGTTATAAACCTTCG-GGCA-TCGCAGCTCGGCCAGC 2025 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | ||||| ||| |||||||||| ||||||| | ||||||||| || | | Sbjct 2026 AGCCGGTCCGCCACGAACTCGATGTACGCCTTCATGAGGTCGCAGTTCATGCCGATCATG 2085 Query 48017 GACACGGGCA 48026 | || |||| Sbjct 2086 GCGACCGGCA 2095 >seq150367 Length=3699 Score = 141 bits (156), Expect = 2e-28 Identities = 374/568 (66%), Gaps = 31/568 (5%) Strand=Plus/Plus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| | ||| | ||| || |||| ||||| || | |||||||| || Sbjct 1848 CAGGCAAAGTCACAGTGTAGGCCCTCATCCCTACTGATCAGTTCATTGGAGAACGTCAGC 1907 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | ||| ||| ||| ||||| | | || || || ||||| ||||| ||| Sbjct 1908 CC-GGCATTATCCCTATCTTTTTCAGCCAAATGTTAGCTGCAAAGGAGCCCGAGAAAAAG 1966 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||| | ||||| || || || | || | || | |||||| | Sbjct 1967 ATGTCTTCCACCGCATTAAAGGC----AACCACGCTGCA------------TTGTCTCCG 2010 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| ||| ||||| || ||||||||||| || ||| | ||||| | || | Sbjct 2011 ATCCATCTAAGAGCCCATTCAGCCTTCTTCTTTGCACACGGCGTGGTCTCATTCGCATTG 2070 Query 48371 AAGAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 ||||| | || | || |||| | ||| | |||| || || ||||| Sbjct 2071 AAGAGGTGCT--CCTTCTCCTGTGGATCCTTGATGAAGGTGTCGATCAAGAGACTGTACA 2128 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | |||||||| | ||| || || || || ||||| || |||||| ||||||||| || Sbjct 2129 TTTCAGAGTGAATATTTTCCATGGCAATTTGGAAGCCCTAGAAGCACCTGGCCTCGGTCA 2188 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGAC-----TATCCCATCTGA 48543 ||| || ||| | ||||||||||| ||||||||||||||| | ||||| Sbjct 2189 CCTTGACCTCTTGGCTGAATCTCTCCACCAGATTCTCATTGACGTTGGTTGTCCATCGCT 2248 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 ||| |||||||| || ||||| ||||| | ||| || | | || | | || | Sbjct 2249 AGCCGCAAAGAATGCCAGGACGTGTTTGATGAAGTGTCTTTTGTCATCACTCAGCTTCTC 2308 Query 48604 CCA----GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659 ||| ||| || | ||||| ||||| ||||| || || |||||||| || || Sbjct 2309 CCAGTAGGCCAAGT-CCTCTTTCGAGAGGTCTACTTCCTCAACTGTCCAGAATGATGCCT 2367 Query 48660 GTGCTTTTTTGTACATGCCCCATATGTC 48687 | ||| || ||||| | ||||||||| Sbjct 2368 AGGTTTTCTTCTACATCCGCCATATGTC 2395 >seq23123 Length=2086 Score = 107 bits (118), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || || |||||||| | ||| | ||| ||||||| ||||||| Sbjct 573 CTGGAACTCCCCAGACAGCACCCTGCGTGTGTAGATGTTGCTTGTGTAGGCCTCGATGGA 632 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| |||||||| ||| || || |||||||| |||| ||| || || Sbjct 633 CTCGTTGTTACCCAGGATCTGTGCGGTGGACGCAGTCGGCATGGGGGCCAGCAGCAGGCT 692 Query 213038 GTTCCTCACTCCGTGCT 213054 |||||||||||||| || Sbjct 693 GTTCCTCACTCCGTACT 709 >seq195337 Length=3657 Score = 105 bits (116), Expect = 1e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| ||||||||||| |||||||| || |||||| |||||||| || ||| Sbjct 2734 GTGTACTCCACAATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCCCAGGTTTTGCTGG 2793 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 || ||||| |||| | ||||||||| |||||||||||| |||||||| Sbjct 2794 TTGGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCGGTCTC 2846 >seq93348 Length=6301 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| ||||| || | ||| || || || |||||||| || |||||| ||||||||| Sbjct 5147 GTACATTTCAGATTGAATATTTTCCATGGCAATCTGGAAGCCATAGAAGCACCTGGCCTC 5206 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 |||||| | ||| | ||||||||||| |||||| |||||||| || ||||||| Sbjct 5207 GGCCACCTGGATCTCTTGGCTGAATCTCTCCACCAGATTGTCATTGACGATACCATCTG 5265 >seq88155 Length=6096 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 213775 ATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCG 213834 |||||| ||||||||| |||||||||| | || || | ||||||||||||||||| Sbjct 274 ATGCGG-ACACATGAGAGTCCAGTCCCCATTCTCCTCCACCCGCTGCATGAACAGGTCCG 216 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894 | | ||||| ||| |||||||||| | | | ||| || || | ||| |||| Sbjct 215 GAATCCACATGGCGTAAAACAGGTCCCGAGCACGCTGCTCTTCTTTGCCCGTGTTCTTGC 156 Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954 | || || || || |||||||| |||||||| ||||| | ||| ||||| || || | Sbjct 155 GGGCGTCAAGGAACTCGAAGATGTCAGCGTGCCAGGGCTCGAGGTACATGGCGAAAGCAC 96 Query 213955 CCGG 213958 | || Sbjct 95 CAGG 92 Score = 96.9 bits (106), Expect = 6e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||| | ||||| ||||| ||||| || || |||||| ||||||||||| ||| Sbjct 1463 GTGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCCCAGGTTCTGCTGG 1404 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||||| |||| | ||||||||| |||||||||||| || |||||| |||| Sbjct 1403 TTCGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCCGTCTCTGTCTGG 1344 Query 213648 G 213648 | Sbjct 1343 G 1343 >seq178124 Length=5838 Score = 93.3 bits (102), Expect = 8e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| ||||| || | || || || || |||||||| || |||||| ||||||||| Sbjct 2331 GTACATTTCAGATTGAATATCTTCCATGGCAATCTGGAAGCCATAGAAGCACCTGGCCTC 2390 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 |||||| | ||| | ||||||||||| |||||| |||||||| || |||||| | Sbjct 2391 GGCCACCTGGATCTCTTGGCTGAATCTCTCCACCAGATTTTCATTGACGATACCATCTAA 2450 Query 48544 A 48544 | Sbjct 2451 A 2451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929059976317440