Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq184351 178 2e-39 seq88155 102 2e-16 seq195337 91.5 3e-13 >seq184351 Length=2863 Score = 178 bits (196), Expect = 2e-39 Identities = 236/325 (73%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 25687 TGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTT 25746 |||||||| ||||||||||| ||||| ||||| |||||||| ||| |||| || || Sbjct 2475 TGTTTCTATGGTTTCCAGATCGCCATGGAAAACGTGCACTCGGAGATGTA---CAGCCTG 2419 Query 25747 CTGAT-GACG--TACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAG 25803 ||||| ||| ||||| ||| |||||| || | |||||| ||| | ||| Sbjct 2418 CTGATTGACAGCTACATCCGCGACCCGGCCGAGCGACAGATGCTGTTCCACGCCGTGGAG 2359 Query 25804 CACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC 25863 ||| || || | | | |||||| ||||| || |||||||| |||| || | Sbjct 2358 ACCATGCCGTGCGTGCGGCGCAAGGCGGACTGGGCGCTGCAGTGGATCGCCAGCAAGGAC 2299 Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923 | ||||| ||||||||||| || ||||| ||||| ||||||||| | |||||| || Sbjct 2298 ACGACGTTCGGCGAGCGGCTTGTGGCCTTCGCTGCGGTGGAGGGCGTGTTTTTCTCGGGC 2239 Query 25924 TCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCC 25983 ||||||||||||||||||||||| || || ||| | ||||| ||| || || Sbjct 2238 TCGTTTGCGGCCATCTTCTGGCTGAAAAAGCGCGGGCTGCTCCCCGGCCTGACGTTCTCT 2179 Query 25984 AACGAGCTCATCAGCAGGGACGAGG 26008 |||||||| |||||| | ||||||| Sbjct 2178 AACGAGCTGATCAGCCGAGACGAGG 2154 >seq88155 Length=6096 Score = 102 bits (112), Expect = 2e-16 Identities = 173/248 (70%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 221936 TACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC-CT 221994 |||| || ||||| | ||||||| ||| || | || ||||| || | ||| | Sbjct 333 TACCTTGTGTAGAGTTTCTCAAACTCTTCTCCCCAACAATCCTCCAGACCGGTGCACTCA 274 Query 221995 GGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGG 222054 |||| |||||| ||| |||||| | || || | |||| ||||||||| |||||||| Sbjct 273 TGCGG-ACACATGAGAGTCCAGTCCCCATTCTCCTCCACCCGCTGCATGAACAGGTCCGG 215 Query 222055 GATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCT 222114 ||||||| || | ||| || || | | |||||||| || ||| |||| || | Sbjct 214 AATCCACATGGCGTAAAACAGGTCCCGAGCACGCTGCTCTTCTTTGCCCGTGTTCTTGCG 155 Query 222115 CAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCC 222174 || | ||||| || |||||||||||||| ||||| || || | ||| | ||| || Sbjct 154 GGCGTCAAGGAACTCGAAGATGTCAGCGTGCCAGGGCTCGAGGTACATGGCGAAAGCACC 95 Query 222175 GGGTCGCT 222182 || |||| Sbjct 94 AGGACGCT 87 >seq195337 Length=3657 Score = 91.5 bits (100), Expect = 3e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 221418 TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477 ||| ||| ||| ||||||||||||||||||| ||||||||| || ||||||||| Sbjct 1581 TCATGGCTCCGTAGTAGATGGTCTCAAAGATCTGCTTGTTGAGGTGCTGAGCCTCGGGAC 1640 Query 221478 AAGTGAAGGGCATACGCAGC-ATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| || ||||| | | ||||| | ||| || || ||||||| |||||| ||| Sbjct 1641 TCTCGAACGGGTAACGCATCAAGATGAAACA-GTCAGCGAGACCCTGTATTCCGATGCCG 1699 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAA 221560 || || | ||| ||| |||||||| Sbjct 1700 ATAGGACGGTGCCTCTTGTTGGAA 1723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926379111815040